Gene Mmcs_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1296 
Symbol 
ID4110133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1401482 
End bp1402000 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content65% 
IMG OID638030417 
Productmembrane-flanked domain-containing protein 
Protein accessionYP_638464 
Protein GI108798267 
COG category[S] Function unknown 
COG ID[COG3428] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.337275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGATACC CCGACAACGT GCTGGCCAGA GACGAGCAGG TGGTCCTGCA CAGGCACCCG 
CACTGGAAGC GGTTGATCGG CGCGGTGCTC GTGCTGTTGT TCACCAGCGC GGCGGCCGCA
TTCGTGGCCG GATACGTCAA CACACTCGAG TGGGACGCCT CCGCCAAGAA CGTCATCTTC
CTCGTCATCG GCGGCATCTG GCTGGTGCTC GTCGGCTGGC TTACGGTGTG GCCGTTCCTC
AATTGGTGGA CGACGCACTT CGTCATCACC GACCGGCGGG TGATGTTCCG CCACGGTCTG
GTCACCCGCG CCGGGATCGA CATCCCGCTG GCACGGATCA ACAGTGTCGA GTTCCGGCAC
GGCCTACTGG ATCGGATCCT GCGCACCGGA ACGCTCGTCA TCGAGTCAGC GGCGCAGGAC
CCACTCGAGT TCCACGACAT CCCCCGCGTG GAACACGTCC ACGCGCTGCT CTATCACGAG
GTCTTCGACA CCCTGGGGTC CGAAGAGTCA CCGAGCTGA
 
Protein sequence
MGYPDNVLAR DEQVVLHRHP HWKRLIGAVL VLLFTSAAAA FVAGYVNTLE WDASAKNVIF 
LVIGGIWLVL VGWLTVWPFL NWWTTHFVIT DRRVMFRHGL VTRAGIDIPL ARINSVEFRH
GLLDRILRTG TLVIESAAQD PLEFHDIPRV EHVHALLYHE VFDTLGSEES PS