| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1227 |
|---|
| Symbol | sdhB |
|---|
| ID | 4110064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 1325923 |
|---|
| End bp | 1326699 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638030348 |
|---|
| Product | succinate dehydrogenase iron-sulfur subunit |
|---|
| Protein accession | YP_638395 |
|---|
| Protein GI | 108798198 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.418291 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAC CTGCAATCGA GAAGAACGAA GCCACCACAC CGCCGATGCC CGAGGGCGCG
GTCATGGTGA CGCTCAAGAT CGCCCGGTTC AACCCGGAGG CACCTGACGA CGCCGGCTTC
CAGAGCTTCC GCGTCCCGTG CCTGCCCACC GACCGGCTGC TCAACCTGCT GCACTACGTG
AAGTGGTACC TCGACGGCAC GCTGACGTTC CGCCGGTCCT GCGCGCACGG CGTGTGTGGC
TCGGACGCGA TGCGCATCAA CGGGGTCAAC CGGCTGGCGT GCAAGGTGCT GATGCGCGAC
ATGCTGCCGA AGAACCCGAA GAAGCAGCTC ACCATCACCA TCGAGCCGAT CCGCGGCCTG
CCCGTGGAGA AGGACCTCGT GGTCGACATG GAGCCGTTCT TCGACGCCTA CCGCGCGGTC
AAGCCCTACC TGATGACCAG CGGTAACCAG CCCACCAAGG AACGCATCCA GAGCCAGGTC
GACCGGGCCC GGTACGACGA CACCACCAAG TGCATCCTGT GCGCGGCGTG CACCACCAGC
TGCCCGATCT ACTGGACCGA GGGCAGCTAT GTGGGCCCGG CGGCGATCGT CAACGCCCAC
CGGTTCATCT TCGACAGCCG CGACGAGGGT GCGGCCGAGC GTCTCGACAT CCTCAACGAC
GCCGACGGTG TGTGGCGCTG CCGCACGACG TTCAACTGCA CCGAGGCCTG CCCGCGCGGC
ATCCAGATCA CCCAGGCGAT CCAGGAGGTC AAGCGCGCGC TGATGTTCGC CCGCTGA
|
|---|
| Protein sequence | MSAPAIEKNE ATTPPMPEGA VMVTLKIARF NPEAPDDAGF QSFRVPCLPT DRLLNLLHYV
KWYLDGTLTF RRSCAHGVCG SDAMRINGVN RLACKVLMRD MLPKNPKKQL TITIEPIRGL
PVEKDLVVDM EPFFDAYRAV KPYLMTSGNQ PTKERIQSQV DRARYDDTTK CILCAACTTS
CPIYWTEGSY VGPAAIVNAH RFIFDSRDEG AAERLDILND ADGVWRCRTT FNCTEACPRG
IQITQAIQEV KRALMFAR
|
|---|
| |