| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1164 |
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| Symbol | |
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| ID | 4110001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | + |
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| Start bp | 1259999 |
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| End bp | 1260577 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638030285 |
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| Product | RNA polymerase sigma factor SigD |
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| Protein accession | YP_638332 |
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| Protein GI | 108798135 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTTT CGGGAGATCG TCTCGATGCT GTCGTCGCTG AGGCAGTGGC GGGCAATCGA
GATGCACTCC GGGAAGTGCT GGAGACCATT CGACCGATCG TCGTGCGGTA CTGCCGAGCC
AGGATCGGCG CGACGGAACG AAGTGGTCTG TCCGCAGACG ACGTTGCGCA GGAGGTGTGC
TTGGCCGCCA TCACGGCGCT GCCGCGCTAC AAGGATCAGG GACGACCGTT CCTCGCCTTC
GTGTATGGCA TCGCAGCGCA CAAGATCGCG GACGCCCACC GATCGGCGAG CCGAAACAAA
TCCGACCCCA CCGACGTGGT GCCGGAACGG TTCTCCGGCG AGGCGGGCCC CGAACAGCTG
GCCATCAACG CCGAATCGTC GGCCCGGATG GAGAAGCTGC TCGGTGTGCT GCCGGACAAG
CAGCGCGAGA TCCTCATCCT GCGCGTCGTC GTCGGCATGA GCGCCGAAGA AACCGCCGAG
GCCGTCGGGA GCACCGCCGG AGCGGTCCGC GTGGCCCAGC ACCGCGCGCT GGCGCGACTC
AAGGCCGAGA TCATCGCAAC GGGGCACGAC CATGCCTGA
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| Protein sequence | MTLSGDRLDA VVAEAVAGNR DALREVLETI RPIVVRYCRA RIGATERSGL SADDVAQEVC
LAAITALPRY KDQGRPFLAF VYGIAAHKIA DAHRSASRNK SDPTDVVPER FSGEAGPEQL
AINAESSARM EKLLGVLPDK QREILILRVV VGMSAEETAE AVGSTAGAVR VAQHRALARL
KAEIIATGHD HA
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