Gene Mmcs_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1049 
Symbol 
ID4109888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1147355 
End bp1147855 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content70% 
IMG OID638030172 
ProductRNA polymerase sigma factor SigL 
Protein accessionYP_638219 
Protein GI108798022 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATC CGGAAGCCAC GATGATGCGC GTGCTCTACG ACGAGCACGC CGATGCATTG 
TGGCGGTACG CGCTCAAACT GACCGGTGAC GCCGCGACCG CCGAGGATGT CGTCCAGGAG
ACGCTGCTGC GGGCCTGGCG GCACCGGCCG AACGGGTCGG CGCGGGCCTG GTTGTTCACC
GTGGCCCGCA ATCTGGTGAT CGACGAGCGG CGCAGCGCGC GCTACCGCCG CGAGGCCGGG
ACCCCGGACG TCGACACCGT GGCGCAGCCC AGCGAACCGG ACAAGGTGGA CTCCGCGCTG
GACCGGATGC TGATCGGCTC GGCGCTCGCG CAGTTGTCCG AGGACCACCG GGCGGTCGTC
CGGCGCGCGT ACTACCAGGG GTGGACGACG GGGCAGATCG CGGCGGAACT CGAGATCCCG
GAGGGGACCG TGAAGTCCCG GCTGCACTAC GCCGTGCGGG CGTTGCGACT GAACCTGCAG
GAGATGGGGG TGACGCGATG A
 
Protein sequence
MDDPEATMMR VLYDEHADAL WRYALKLTGD AATAEDVVQE TLLRAWRHRP NGSARAWLFT 
VARNLVIDER RSARYRREAG TPDVDTVAQP SEPDKVDSAL DRMLIGSALA QLSEDHRAVV
RRAYYQGWTT GQIAAELEIP EGTVKSRLHY AVRALRLNLQ EMGVTR