Gene Mmcs_1030 details

Gene Information

• Locus tag: Mmcs_1030
• Symbol: rplF
• ID: 4109869
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 1129635
• End bp: 1130174
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 638030153
• Product: 50S ribosomal protein L6
• Protein accession: YP_638200
• Protein GI: 108798003
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000375476
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCGTA TTGGAAAGCA GCCGGTTCCG GTTCCCGCCG GAGTCGATGT GACGATCGAA 
GGTCAGAACG TATCGGTGAA GGGGCCCAAG GGCACTCTGT CGCTGGCGGT CGCCGAGCCG 
ATCGTCGTGG CGCGTGATGA CGAGGGCGCC ATCGTGGTGA CCCGGCCCAA CGACGAGCGG 
CGCAACCGCT CGCTGCACGG GCTGTCCCGC ACCCTGGTGG CCAACCTGGT CGAGGGCGTC 
ACGCAGGGAT ACACCACCAA GATGGAGATC TACGGCGTCG GTTACCGCGT CGCGCTCAAG 
GGTTCCAACC TGGAGTTCGC GCTCGGTTAC AGCCACCCCG TGGTCATCGA GCCGCCGGAG 
GGCATCACCT TCGCGGTCGA GACGCCCACG AAGTTCTCGG TCTCGGGTAT CGACAAGCAG 
AAGGTCGGCC AGATCTCGGC GATCATCCGC CGTCTGCGCC GCCCCGACCC GTACAAGGGC 
AAGGGCGTGC GTTACGAGGG TGAGCAGATC CGCCGCAAGG TCGGAAAGAC AGGTAAGTAA 

 

Protein sequence

MSRIGKQPVP VPAGVDVTIE GQNVSVKGPK GTLSLAVAEP IVVARDDEGA IVVTRPNDER 
RNRSLHGLSR TLVANLVEGV TQGYTTKMEI YGVGYRVALK GSNLEFALGY SHPVVIEPPE 
GITFAVETPT KFSVSGIDKQ KVGQISAIIR RLRRPDPYKG KGVRYEGEQI RRKVGKTGK