Gene Mmcs_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1016 
SymbolrplB 
ID4109855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1120665 
End bp1121501 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content69% 
IMG OID638030139 
Product50S ribosomal protein L2 
Protein accessionYP_638186 
Protein GI108797989 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTC GCAAGTACAA GCCGACGACC CCGGGTCGCC GCGGTGCCAG CGTCTCCGAT 
TTCGCCGAGA TCACTCGCTC GACCCCGGAG AAGTCGCTGG TCCGTCCGCT GCACGGTAAG
GGCGGACGCA ACGCGCACGG CCGCATCACC ACCCGGCACA AGGGCGGTGG CCACAAGCGT
GCCTACCGGG TGATCGACTT CCGTCGCCAC GACAAGGACG GCGTCGACGC CAAGGTCGCG
CACATCGAAT ACGACCCGAA CCGCACCGCG AACATCGCAC TGCTGCACTA CCTGGACGGC
GAGAAGCGCT ACATCATCGC GCCGTACGGG CTGAAGCAGG GCGCGATCGT GGAGTCCGGC
GCCAACGCCG ACATCAAGCC GGGTAACAAC CTGCCGCTGC GCAACATCCC CGCCGGCACC
GTGATCCACG CCGTGGAGCT GCGGCCCGGT GGCGGTGCGA AGCTCGCCCG CTCGGCCGGT
GTCAGCATCC AGCTGCTGGG CAAGGAGGGC AGCTACGCCT CCCTGCGTAT GCCGTCCGGT
GAGATCCGTC GCGTCGACGT GCGCTGCCGC GCCACCGTCG GCGAGGTGGG CAACGCCGAG
CAGGCCAACA TCAACTGGGG CAAGGCCGGC CGTATGCGGT GGAAGGGCAA GCGCCCGACC
GTCCGCGGTG TCGTGATGAA CCCGGTCGAC CACCCGCACG GCGGTGGTGA GGGCAAGACC
TCCGGTGGTC GCCACCCGGT CAGCCCGTGG GGTAAGCCCG AGGGCCGCAC CCGCAAGCCG
AACAAGCCGA GCGACAAGCT CATCGTCCGA CGCCGGCGCA CCGGCAAGAA GCGCTAG
 
Protein sequence
MAIRKYKPTT PGRRGASVSD FAEITRSTPE KSLVRPLHGK GGRNAHGRIT TRHKGGGHKR 
AYRVIDFRRH DKDGVDAKVA HIEYDPNRTA NIALLHYLDG EKRYIIAPYG LKQGAIVESG
ANADIKPGNN LPLRNIPAGT VIHAVELRPG GGAKLARSAG VSIQLLGKEG SYASLRMPSG
EIRRVDVRCR ATVGEVGNAE QANINWGKAG RMRWKGKRPT VRGVVMNPVD HPHGGGEGKT
SGGRHPVSPW GKPEGRTRKP NKPSDKLIVR RRRTGKKR