Gene Mmcs_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_0889 
Symbol 
ID4109730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp981468 
End bp982664 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content72% 
IMG OID638030011 
ProductAcyl-CoA dehydrogenase, type 2-like protein 
Protein accessionYP_638061 
Protein GI108797864 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGTGA TCGCCTCCGC CGACGACGCT CTCGACGTCG CGGCGAAACT GTCCGCGGAG 
TTCGACGCCG AGGCCTCGGC CCGTGACGCT GAGCGGCAGT TGCCGCACGA GCAGATCAAG
GCGCTCAAAG AGTCCGGGCT GCTGGCGATC TCGGTGCCCG CCGAACACGG CGGCATCGAC
GCACCCGCCA CCGTGCTGGC CGAGGTGTTC CGGCTGATCG CCCACGCCGA TCCGTCGCTG
TCGCAGATTC CGCACTCGCA CTTCGTATTC CTCGAGGCGC TGCGACTGCA GGGCACCGCC
GATCAGCAGG CGTACTTCTA CCGGCAGGTG CTCGACGGCG CGCTGCTGGC CAACGCGCAG
TCCGAGCGCG GACCGCATCC GATCGACGTC GACACCACGA CGCTGACGCG CCGATCGTCG
GGTGACTACG TGCTGACCGG CCGCAAGTTC TACTCGACCG GTGCGCTGTT CGCGGACTGG
CTGGTGGTGC GGGCGTCGCT CGACGACGGG TCGGTGCCGA CGGCGTCGAC ACCCAAGGCG
GTGGCGTTCG TGCCGCGTGA CGCCGACGGG GTGGACGTCG CCGACGACTG GGAGGGGATG
GGTCAGCGGA CGACGGCGTC GGGCACGGTG ACGCTCGCCG ACGTCGCGGT GCCGGCCGAG
CATGTCGTGC CGTTCTCGCC GATCTTCGCC GAGCCGACGA CCTACGGCGC CCGGGCGCAG
TTGCTGCACA GCGCGATCGA CGTCGGTATC GCGACGGGGG CGCTGGCCGC CGGGGTGCGC
CAGGCCGAAC GCGCCCGCCC GCACTTCGAG GCGAACGTGG CCACGGCCGT CGACGATCCG
ACACTCATCC AGGCCGCCGC CGAGTTGACC GTCACCGTCC GCGGCGCCCA AGCCCTGCTG
GTCGAGGCCG CCCGCGCGGT GGACGCCGCG ACCGAACACC TCACCGAGGA GTCGGCGGCC
GCGGCGTCGG TGGCCGTCGC CGTCGCGAAG GTCGCGGCGG TGCGGGCCTC GCTGGAAGCC
GCGACCGGGC TGTTCGAATT GGGCGGTACG CGAAGCGCTT CGGTGTCGGG CAACCTGTCG
CGGTACTGGC GTGACGCCCG CACGCACACC CTTCACGATC CGGTGCGGTG GAAGCTGCAG
CACATCGGCC GCTACACGCT GTCGGGTACG AGGCCTCCGC GCCACGGCCA AATCTGA
 
Protein sequence
MTVIASADDA LDVAAKLSAE FDAEASARDA ERQLPHEQIK ALKESGLLAI SVPAEHGGID 
APATVLAEVF RLIAHADPSL SQIPHSHFVF LEALRLQGTA DQQAYFYRQV LDGALLANAQ
SERGPHPIDV DTTTLTRRSS GDYVLTGRKF YSTGALFADW LVVRASLDDG SVPTASTPKA
VAFVPRDADG VDVADDWEGM GQRTTASGTV TLADVAVPAE HVVPFSPIFA EPTTYGARAQ
LLHSAIDVGI ATGALAAGVR QAERARPHFE ANVATAVDDP TLIQAAAELT VTVRGAQALL
VEAARAVDAA TEHLTEESAA AASVAVAVAK VAAVRASLEA ATGLFELGGT RSASVSGNLS
RYWRDARTHT LHDPVRWKLQ HIGRYTLSGT RPPRHGQI