Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_0811 |
Symbol | |
ID | 4109655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 888756 |
End bp | 892361 |
Gene Length | 3606 bp |
Protein Length | 1201 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638029936 |
Product | helicase-like protein |
Protein accession | YP_637986 |
Protein GI | 108797789 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTGAGT ACCGATTTCG GTGGTCGAAC CTCCCAGACT GGCTGCTCGA CTCCCTCTGC TACGCGCTCC TCGTCAACTA CGCGAACGTC GACCGCGCAG AAGCGCTACG GTCCGTCTAC CGCGCGCGTC CCACGGACGA CTTCGTCAAG GAAGCATGGC CAGTACTTCG AGATGTGTGG TTGTTTCGGG ACCGCGACTC GCGAACCCTT GTCGTCAACG CTCTACGCAC GCGCCGAGGC GATGAAGGGC GAATCACCAA TCGCCGGGCT CAGATGGAGT ATCTTCGCCG ACTGCGGAAC GCGAAGAACC TCCGAGATGT CGTCCGCGTG GCATTCATCG CATACGGAGA GACGCGACAT GCGGATGCTG ATAGTCCTGG TGCGCCCCGC ACAAGGTACA AAGACCGCCG CAGCCCCTCA TCAGCCAACG GAGGTTCCGT GACCACCACC ACGCAGGAGC CCGTGGAGCA CCACGTCGCG GTTCCCGAAG TCGGCCAGAT CGTCACCGTG CGCGGCGCAA ATTGGGCAGT TACCGACGTC CAGCAACAGA GCCTGCCTCG CAGTGCACAC GACGATGCGG TCCGGCAGCT CCAGAACGCG GTGACACTCC AGTCGGTCGA GGACGACCGA CTCGGCGACG AGCTACGCGT CGTCTGGGAA CTCGAGCCGG GGCGCAGGCT GAAACCCCCC CAGGATCTGC CCACCAAGAT CGCTCCCGAT CGTTTCGATC CGCCCGAGCG GCTGGCGGCT TTCATCGACG CACTGAGGTG GGGCGCCGTC ACAAGCGCCG ATGTGAAGAC GGTGCAGGCG CCGTTTCGAT CGGGCGCCAA GGTGGAGCCG TACCAGTTGG AGCCGCTCCG ACGAGCACTC AGCGCACCGC GTGCCAACTT GCTTCTCGCC GACGACGTCG GCCTCGGCAA GACGATTGAA GCGGGAATGG TCATCCAGGA ACTGTTGCTC CGCCACCGGG CACGCACGGT CATCATCGTC TGCCCCGCCG GTCTGTCCGT GAAGTGGCAG AACGAGATGC ACGACAAGTT CGGCCTCGAC TTCCGGATCG TCAACTCCGA AACGATGAAA GAAGTTCGCC GCACACACGG TGTGCACGCC AATCCGTTCA CGCTGTTTCC GCGCATCATC GTGTCGATGG CGTGGCTTCC CGGCCCACGC GCGCAGCGCC AGCTCCGCGA CGCGCTGATC ACCAAGTCAC GTGGCGCAGG GCCGCGCTTC GCCTTTGACG TCCTCGTCGT CGACGAGGCT CACCACGTGG CTCCGGCAAC CCCGACAAGA ACGGACAAAG TCGGCCTGCG CAAGGGCTAT GCCGTCGATT CCCAGCGCAC CCGGGCCGTG CGCGACCTCG CCGAGCGCTC CGAACACCGG CTCTTCCTGT CGGCAACCCC GCACAACGGC TACACCGAGT CATTCACAGC ACTACTGGAG ATGATCGACC CGCAGCGCTT CGTCCGGGGC AAGTTCATCG ACGAACAGGC GCTGCAAACC GTCGCCGTAC GACGTCTCAA GAAGGACTTG CCCGGCCAAT TCCACGAACG GAAGGTCGAA AAGTTGCTCA TCACTCCATC AGCCGACGAA GAAGCAGCAT ACGACCGGTT GATCGCATTC ACGCAGCGGC GCGACACTGC CGCGAAGGGC GACGACCGCG GCGCCAAGGA CATGGCTACG CTGCTCTTGA AGAAGCGGTT CTTCTCGTCG CCCGTGGCTT TCGCCCGAAC TGTCGATGTA TACAAGGACA CCCGCCAGCG TGGCTTGGTT GTCGACTTCG ACGCGGAGTA CGACGAAGTC CTCGGTCTCG ACGCCGACGA GCTGGAAGAA GGGCGCGTCG AACAGCCGGA AACTCAAACT CTTCAACAGA CCAAGAACGC TCTACCGCCA CTTACCGCCG CGGATAAGGA CGACCTCGAC TGGCTGAGCG ATTGGGGGCA CAGCTACGAA GCACGCCCCG ACTCGAAGCT CACAGCCCTC ATCGACTACC TCGAAGCCAA CACGAAAGCC AACGGCGAGT GGCTCAACGA ACGAGTCGTC GTCTTCACCG AATACGTCGA TACGCTCGAA TGGATCCACG GCATCCTTCG ACAACGTGGT TACGAGGCGG ACCGCGTCGC GGTGATCGAC GGCTCTACGG ACGGTGAACA ACGCGAAGTC ATCCGTGCCC GTTTCAACAC CGACCCGTCT CGCGAGAAGC TGCGGATTCT GCTGGCGACG GATGCCGCCG GCGAAGGGAT CGACCTGCAG GATTACTGCC ACCGGCTCGT CAACTTCGAC ATCCCGTTCA ATCCCAACCG GCTCGAGCAA CGCATCGGCC GTATCGACCG TTATGGACAG ACCCACGACC CGGAGATTCG CCACTTCGCG ACAGACGACG AGAAGTCTCA ACTCACAAGA GACGTCGACC TGCTGGCACG AGTCGCCAAG AAAGTCGCGC AGATCATGGC CGATCTCGGT TCTGCCAACG AGATCATCGC GCCAGACCTG CAACGCCAAC TCAGCGGCAT CGACGCAGCG CCGCGCAAGG GGAAGGCCGA AAAAAGCCCG ATCGGGCAGA TGCTCGCTGG CGGACGGGAC GTCGGCGCAG AGCTCACCAA ATTGGCGCAG GACATCACCG AGAGTCGTGA AACGCTCCAC TTGCAGCCGG CGAACTTGCA GCGGGTCGTC GATGTCGCGT TCGAGCTCGA TCGGCTACCT CCGATCGAGG AAGTCGGGTC GGACCGCACC GACGTTCCCG TCTTTCGCCT GCCCGCGCTC GGCAGCTCCT GGGAGCAGGT GACGCGTGGG CTCACGACGG CCCTGGACCG TGAAAGTCTT CGACCGATCG CGTTCGATCC GGCCGTGCTC GCGGAAGATC CCGACGTGGT GTACATGCAC CTCGGAAGTC CCCTCCTTCA GCGCGCCACC CGCCGATTGC GGTCTGCTCT GTGGGGCGGC GAACGGTCGC TGGAAAGGGT AACCGCAGTC GTCGTACCTG ACCTCGAGGA GTCCTTCGCT GCGGCGGTCA CCCGCTTGAT ACTCATCGGG AAGGCAGGGC TTCGACTTCA CGAAGAGGTG TTCCTCGCAG GCACACGGTT GGGCCGTCGC CAAGCAGTCG GTGAACACCG CGCCGAAGAT CTGCTCGAGA ACGCCCTCGA CGCGGAGAGC CTCGAGCCCG TCCCGACATC CATCGCCGAA CAACTCGCGA AAGCGTGGGA CGACGACAAG GCCGACGGCC TCCGAGCGCG TGTGGCCAAG GCGGTCGCGG ACCGGGTGGA ACGACGACAG CAGGCAGTCA CCGCGCAGCT GGAAGAGCGC CGGACGGCAG ATCGTGAACG AGTCATCGCG ACGTTCGATC GATTTGGTGC CACGCTGAAA TCTGCTCTGG CAGAGGCAGA AGCTATCGAA TCCGAGCTCA CGCTGTTCGA TGATGAGCGC CGTCAAAGCG AACGGGACCT GCGCCATATT CGCGCGCGCA TGGACGCGTT GGCCGATGAG CGTGACGAGG AGTTGGTGGC GGTGGACGCA CGTTATACCG ATGTGCAGGC TCGGACGTTC CATGGGGCGG TGTTGTTCGC GTTGTCGCCG AAGGATATCG AGCGGGGGGA GGTGAGCATC CGATGA
|
Protein sequence | MPEYRFRWSN LPDWLLDSLC YALLVNYANV DRAEALRSVY RARPTDDFVK EAWPVLRDVW LFRDRDSRTL VVNALRTRRG DEGRITNRRA QMEYLRRLRN AKNLRDVVRV AFIAYGETRH ADADSPGAPR TRYKDRRSPS SANGGSVTTT TQEPVEHHVA VPEVGQIVTV RGANWAVTDV QQQSLPRSAH DDAVRQLQNA VTLQSVEDDR LGDELRVVWE LEPGRRLKPP QDLPTKIAPD RFDPPERLAA FIDALRWGAV TSADVKTVQA PFRSGAKVEP YQLEPLRRAL SAPRANLLLA DDVGLGKTIE AGMVIQELLL RHRARTVIIV CPAGLSVKWQ NEMHDKFGLD FRIVNSETMK EVRRTHGVHA NPFTLFPRII VSMAWLPGPR AQRQLRDALI TKSRGAGPRF AFDVLVVDEA HHVAPATPTR TDKVGLRKGY AVDSQRTRAV RDLAERSEHR LFLSATPHNG YTESFTALLE MIDPQRFVRG KFIDEQALQT VAVRRLKKDL PGQFHERKVE KLLITPSADE EAAYDRLIAF TQRRDTAAKG DDRGAKDMAT LLLKKRFFSS PVAFARTVDV YKDTRQRGLV VDFDAEYDEV LGLDADELEE GRVEQPETQT LQQTKNALPP LTAADKDDLD WLSDWGHSYE ARPDSKLTAL IDYLEANTKA NGEWLNERVV VFTEYVDTLE WIHGILRQRG YEADRVAVID GSTDGEQREV IRARFNTDPS REKLRILLAT DAAGEGIDLQ DYCHRLVNFD IPFNPNRLEQ RIGRIDRYGQ THDPEIRHFA TDDEKSQLTR DVDLLARVAK KVAQIMADLG SANEIIAPDL QRQLSGIDAA PRKGKAEKSP IGQMLAGGRD VGAELTKLAQ DITESRETLH LQPANLQRVV DVAFELDRLP PIEEVGSDRT DVPVFRLPAL GSSWEQVTRG LTTALDRESL RPIAFDPAVL AEDPDVVYMH LGSPLLQRAT RRLRSALWGG ERSLERVTAV VVPDLEESFA AAVTRLILIG KAGLRLHEEV FLAGTRLGRR QAVGEHRAED LLENALDAES LEPVPTSIAE QLAKAWDDDK ADGLRARVAK AVADRVERRQ QAVTAQLEER RTADRERVIA TFDRFGATLK SALAEAEAIE SELTLFDDER RQSERDLRHI RARMDALADE RDEELVAVDA RYTDVQARTF HGAVLFALSP KDIERGEVSI R
|
| |