| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0668 |
|---|
| Symbol | |
|---|
| ID | 4109514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 728070 |
|---|
| End bp | 728954 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638029794 |
|---|
| Product | pyrroline-5-carboxylate reductase |
|---|
| Protein accession | YP_637845 |
|---|
| Protein GI | 108797648 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
|---|
| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTGGC GCATGGCCAG AATCGCGATC ATCGGTGGCG GAAGTATGGG TGAGGCGCTG
CTGTCCGGGC TGCTCCGGGC CGGCAGGCAG GTCAAGGATC TGGTGGTCGC CGAGAAGCAT
CCGGACCGCG CGAAGTTCCT CGCCGAGAAG CACTCGGTGC TGGTGACCTC CGTCGTCGAG
GCCATCGACA ACGCCCACTA CGTCATCGTC GCGGTGAAGC CGGCCGACGT CGAGCACGTC
ATCGACGACA TCGCCGAGGC CGCCGCCAAC GCCGACACCG ACACCGCCGA GCAGGTCTTC
GTCACGGTCG CGGCCGGGGT GTCGACCGCG TACTACGAGA ACAAGCTGCC GGCGGGCGCA
CCGGTGATCC GCGCGATGCC CAATGCGCCG GTCGTGGTCG GCGGGGGAGT CAGCGCGCTG
GCGCCGGGCC GCTTCGCGAC CCCCGAGCAC CTCAAGGAGG TCTCGGCGAT CTTCGACTCG
GTCGGCGGCG TGCTGACCGT GCCGGAGTCG CAGCTGGACG CGGTGACCGC GGTGTCGGGC
TCCGGGCCCG CCTACTTCTT CCTGATGGTC GAGGCGTTGG TCGACGCCGC GGTGGCCAGT
GGGCTGTCGC GCACGGTGGC CACCGACCTG GTGGTGCAGA CGATGGCGGG TTCGGCCGCG
ATGTTGCTGG AGCGCCTCGA CGAGGCCCAG CCGGTGGGCG ATGCGGCAAT GGGAACGGCG
ATGGACACCA CGGCGGCGCA ACTCCGCGCT ACGGTTACCT CACCGGCCGG TACCACCGCC
GCTGGGCTGC GAGAACTCGA ACGCGGTGGT TTGCGGTCGG CGGTGGCGAA TGCGGTGGAA
GCCGCGAAAA CCCGCTCTGA GCAGCTAGGA ATTACATCAG AGTAG
|
|---|
| Protein sequence | MLWRMARIAI IGGGSMGEAL LSGLLRAGRQ VKDLVVAEKH PDRAKFLAEK HSVLVTSVVE
AIDNAHYVIV AVKPADVEHV IDDIAEAAAN ADTDTAEQVF VTVAAGVSTA YYENKLPAGA
PVIRAMPNAP VVVGGGVSAL APGRFATPEH LKEVSAIFDS VGGVLTVPES QLDAVTAVSG
SGPAYFFLMV EALVDAAVAS GLSRTVATDL VVQTMAGSAA MLLERLDEAQ PVGDAAMGTA
MDTTAAQLRA TVTSPAGTTA AGLRELERGG LRSAVANAVE AAKTRSEQLG ITSE
|
|---|
| |