Gene Mmcs_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_0526 
Symbol 
ID4109372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp582166 
End bp583404 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content68% 
IMG OID638029652 
ProductO-succinylhomoserine sulfhydrylase 
Protein accessionYP_637703 
Protein GI108797506 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID[TIGR01325] O-succinylhomoserine sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCAG AGGTGCCCTC GCGCACGCAA GGAGCGGACA AGCCCTCCGT CCGCCGGCCC 
GCCGAACTGC CCGAGGGGGT CGGTCAGGCC ACCATCGGGG TGCGCGGCGG TCTGCTGCGG
TCCGGTTTCG AGGAGACCGC CGAGGCTCTG TACCTCACGT CGGGCTATGT GTACGCGTCG
GCGGCCGAGG CGGAGAAGGC GTTCACCGGA GAGATCGACC GGTACGTCTA TTCGCGGTAC
GGCAACCCGA CGATCTCGAT GTTCGAGGAG CGGCTGCGGC TGATCGAGGG GGCGCCGGCC
TGTTTCGCGA CGGCGACCGG CATGGCCGCG GTGTTCACGT CGCTGGGCGC GCTGCTGGGC
GCGGGGGACC GGTTGGTTGC CGCGCGCTCA CTGTTCGGTT CGTGTTTCGT GGTCTGCAGC
GAGATCCTGC CGCGTTGGGG TGTGGAGACG GTGTTCGTCG ACGGCGACGA CCTCTCCCAG
TGGGAGGAGG CCCTCTCGGT GCCCACGCAG GCGGTGTTCT TCGAGACACC GTCGAACCCC
ATGCAGTCGC TGGTCGACAT CGCCGCGGTG ACGGAGCTCG CGCATGCGGC GGGCGCAAAA
GTGGTGTTGG ACAACGTCTT CGCCACGCCG CTGCTGCAGC AGGGTTTCCC GCTGGGGGTC
GACGTGGTGG TCTACTCCGG CACCAAGCAC ATCGACGGTC AGGGCCGGGT GCTCGGAGGC
GCGATCCTCG GTTCGCAGGA GTACATCGAC GGCCCGGTGC AGAAGTTGAT GCGTCACACC
GGCCCGGCGA TCAGCGCGTT CAACGCGTGG ACGCTGTTGA AGGGTTTGGA GACGCTGGCG
GTACGGGTCG ACTACTCCAA CCGGTCGGCG GAGCGGATCG CGGAGTTCCT CGAGGGGCAC
TCCTCCGTGA GTTGGGTCAA GTACCCGTTC CTGGAGTCCC ATCCGCAGTA CGACCTGGCC
AAACGGCAGA TGCGCGGCGG CGGCACCGTC GTCACGTTCG AACTCGCCGG CGGTAAGGAA
CGGGCCTTCG AGGTGCTCGA CAAACTGCAG ATCATCGACA TCTCGAACAA CCTCGGCGAC
GCCAAGTCGT TGATCACCCA TCCCGCCACC ACGACCCACC GGGCGATGGG TCCGGAGGGT
CGCGCGGCGA TCGGTCTGGG CGACGGTGTG GTGCGGGTGT CGGTCGGGCT CGAGGACACC
GACGACCTGA TCCGCGATCT CGACCGGGCG CTGGGCTGA
 
Protein sequence
MSSEVPSRTQ GADKPSVRRP AELPEGVGQA TIGVRGGLLR SGFEETAEAL YLTSGYVYAS 
AAEAEKAFTG EIDRYVYSRY GNPTISMFEE RLRLIEGAPA CFATATGMAA VFTSLGALLG
AGDRLVAARS LFGSCFVVCS EILPRWGVET VFVDGDDLSQ WEEALSVPTQ AVFFETPSNP
MQSLVDIAAV TELAHAAGAK VVLDNVFATP LLQQGFPLGV DVVVYSGTKH IDGQGRVLGG
AILGSQEYID GPVQKLMRHT GPAISAFNAW TLLKGLETLA VRVDYSNRSA ERIAEFLEGH
SSVSWVKYPF LESHPQYDLA KRQMRGGGTV VTFELAGGKE RAFEVLDKLQ IIDISNNLGD
AKSLITHPAT TTHRAMGPEG RAAIGLGDGV VRVSVGLEDT DDLIRDLDRA LG