Gene Mmcs_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_0440 
Symbol 
ID4109286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp487612 
End bp488886 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content71% 
IMG OID638029566 
ProductYibE/F-like protein 
Protein accessionYP_637617 
Protein GI108797420 
COG category[S] Function unknown 
COG ID[COG5438] Predicted multitransmembrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.270973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCACT CCCACCCGCA TTCCCACTCG CTGAGCGGGC CGTCCCCGCT CGGCCCGTTG 
GCCGCCAGGA TCGTCGTCGG GTTGCTGGCG CTCATCGGTG TCGCGGTGGC GATCGGCGCG
GTGCTGCTGT GGCCGAGCCA GCAGAAGGCC GACATCCCGC TGCCCTTCCA GAACGCCGAG
GGCGGTGCGG TGACGACGGA GGCCGGGCAG GTGCGCGCCA CCAGCCTGGC GCCGTGCGGC
AGTCCGTCGG CGGGTCAGGT GCTCACCGCC GATCCGGTCC CGACGCCGGC CGACGGGTCC
CAGTGCGTAC AGGTGCTCGT CGCGATCGAC TCGGGGCCCA ACAAGGGCGC CAACACGCTT
CTGGAGTTCA GCGGCGGACC CGGCCAGCCA CAGTTGGCCG CGGGGGACGA CATCCGGCTC
AGCCGTCAGG TGAGCCCGGG CGGCGCCACC AGCTACACGT TCTACGACTA CGCGCGGGGA
TGGCCGCTGG CCCTGCTGGC CGCCGCCTTC GCCGTCGTGG TCGTGGCGGT CGCGCGGTGG
CGGGGTCTGC GCGCGCTGGT GGGCATCGTG GTCGCGTTCG CGGTGCTGGT GGTGTTCCTG
CTGCCCGCCC TGCGCGACGG CGCATCGGCC GTCCCGGTCG CGCTGGTGGC GTCCGCGGTG
ATCCTCTATG CCGTCATCTA TCTGGCCCAC GGTGTCAGCC TGCGCACCAG CGCCGCGCTG
CTCGGCACGC TGACGTCGCT GCTGCTGGCC GCCGTGCTGT CCTGGGGCGC CATCGAAATC
GCCCATCTCA CCGGGCTTTC GGAGGACCAG AACAACGAGG TCGCCGCCTA CCTGGGCAAC
GTGTCGATCA CCGGTCTGCT GCTGGCCGGG TTCATCATCG GCTCACTCGG CGTGCTCAAC
GACGTGACGG TGACCCAGGC GTCGACGGCG TTCGAACTGG CCGAACTGGA GGGCAGTTCG
CGGCGGGCGG TCTTCGTCGG CGCGATGCGG GTGGGCCGTG ACCACATCGC GAGCACGGTG
TACACGCTGG TGCTCGCCTA TGCCGGTAGC GCGTTACCGC TGCTGCTGTT GTTCAGCGTC
GCCAACCGCT CGCTGGTCGA CGTGCTGACC AGTGAGAGCG TGGCCATCGA GGTCGCGCGC
TCGGCCGTCG GCGGTATCGC GCTGGCACTG TCGGTCCCGT TGACGACGGG GATCGCCGCT
GTCCTGGCGA CACCGCGGGC GGACAACCAC CCGCGACGTT TCGCGGTCAG GCCCTGGGGT
ATCCGCCCGC CATGA
 
Protein sequence
MSHSHPHSHS LSGPSPLGPL AARIVVGLLA LIGVAVAIGA VLLWPSQQKA DIPLPFQNAE 
GGAVTTEAGQ VRATSLAPCG SPSAGQVLTA DPVPTPADGS QCVQVLVAID SGPNKGANTL
LEFSGGPGQP QLAAGDDIRL SRQVSPGGAT SYTFYDYARG WPLALLAAAF AVVVVAVARW
RGLRALVGIV VAFAVLVVFL LPALRDGASA VPVALVASAV ILYAVIYLAH GVSLRTSAAL
LGTLTSLLLA AVLSWGAIEI AHLTGLSEDQ NNEVAAYLGN VSITGLLLAG FIIGSLGVLN
DVTVTQASTA FELAELEGSS RRAVFVGAMR VGRDHIASTV YTLVLAYAGS ALPLLLLFSV
ANRSLVDVLT SESVAIEVAR SAVGGIALAL SVPLTTGIAA VLATPRADNH PRRFAVRPWG
IRPP