| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0374 |
|---|
| Symbol | |
|---|
| ID | 4109220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 419811 |
|---|
| End bp | 421388 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638029499 |
|---|
| Product | PPE protein |
|---|
| Protein accession | YP_637551 |
|---|
| Protein GI | 108797354 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG5651] PPE-repeat proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCCCC CCATCTGGAT GGCCCTGCCA CCCGAGGTGC ACTCGGCGCT GCTGTCCAGC
GGCCCCGGCC CCGGGTCGCT GCTGGCCGCC GCGGGGGCGT GGCAGTCGCT GAGCGCCGAA
TATGCCTCGG CCGCAGCGGA GTTGACCGGC ATACTCGGCT CGGTGCAGGC CGGGGCGTGG
GAAGGGCCCA GCGCCGAGCA GTACGTCGCC GCACACACCC CGTACCTCGC CTGGCTGGCG
CAGGCGAGTG CGAACAGCGC GGCGACGGCG GCGCAACACG AGACTGCGGC CGCCGCGTAC
ACCACGGCGC TGGCCACCAT GCCGACGCTG GGTGAGCTGG CCGCCAACCA CGCCACCCAC
GCGGTGCTGC TGGCGACGAA CTTCCTCGGC ATCAACACGA TTCCGATCGC CGTCAACGAG
GCCGACTACG TGCGGATGTG GATTCAGGCC GCCACCAGCA TGAGCACGTA TCAGGCCGTC
GCCGGTGCCG CGGTGGCCGC CGCCCCGACC ACGGCGCCGG CGCCGTATCT GCTGGCGCCG
GGTGTCGGCG AGGCGGGCCA GGCGATGGCG TCGGTTCAGC AGCTCGGCGC GCAGGCCCAG
GCGAGTGAAT CCGGTTCGGC GCTCAACATC TCCGACTCCA TCAACCAGCT GCTCGAGCAG
TACCTGCAGA GCGCGCCCGG CGGTCAGGAG ATCATCGACT TCCTGCGGGA CCCCCTGGGG
AACCTGCAGA CGCTCATCAA CGACTTCATG ACCAACCCGT CGGCCGCGCT GGTGACGTGG
GGGCCGCTGC TGTCGGCCGT GGCCTACCAG GTCTTCACCA ACCTGGTCGG GTGGCCGACG
TGGGCGATGA TCTTCGCATC GCCGTTCCTG CTCGCGGCCC TCATCCCGCT CGGCATCGCC
GGGCTGGTGC TGATCATCGA CGCACTCAAA CCCGAACTGA CCCAACCGCC CGCGGAACAG
ACCGAACCGG CGCCCGCACC GGCCCCACGG CCCGACCAGC AGGTGCTGCC GGTGGCGGGC
GTTCCCGCAC CCGGTGCGCC CGCCACTCCC GGAACGGCGC CGGCGGGCAG TTCGGCCGCC
GCCCCGGCCG CACCCGCCCC CGCCGCGGCG GCAGCCGCCC CACTGGTGCC CTACGCGGTT
CGCGGTGGCG ACCCGGGTGA GGGGTTCACG CCCACGGTGC GCGACTCGAC CGGGGCCAAG
GCACCCGCCG GTGACATCCC GGCCGCCGCC GCGGCGGCGG CCGCCGCCTC GGCCGCGGAA
CGGCGAAAGC GACGGCGCCG CAAGATCACC GAGGTCAAGG GCCGCGGCTA CGCCGACGTG
TACATGGACT ACGAAGACGA CCCCGACGAG CCGCCGATCG TGGAGCCGCG GGTGGCGGCG
TCCTCACGCG GCGCGGGTGC GATGGGCTTC ACCGGTACCG CACCGGGTGC CGCCGATGCG
CGGGCGACGG GGTTGACGAC GCTGTCCCCG GATGCGTTCG GCACCGGGCC GGTCAGCCCC
ATGCTGCCCG GCACGTGGAA CCCCGACAGC GAGCCCGACC AGCCCGCAGA GGGCCAGGAG
GGAGGACCGC GCACCTGA
|
|---|
| Protein sequence | MVPPIWMALP PEVHSALLSS GPGPGSLLAA AGAWQSLSAE YASAAAELTG ILGSVQAGAW
EGPSAEQYVA AHTPYLAWLA QASANSAATA AQHETAAAAY TTALATMPTL GELAANHATH
AVLLATNFLG INTIPIAVNE ADYVRMWIQA ATSMSTYQAV AGAAVAAAPT TAPAPYLLAP
GVGEAGQAMA SVQQLGAQAQ ASESGSALNI SDSINQLLEQ YLQSAPGGQE IIDFLRDPLG
NLQTLINDFM TNPSAALVTW GPLLSAVAYQ VFTNLVGWPT WAMIFASPFL LAALIPLGIA
GLVLIIDALK PELTQPPAEQ TEPAPAPAPR PDQQVLPVAG VPAPGAPATP GTAPAGSSAA
APAAPAPAAA AAAPLVPYAV RGGDPGEGFT PTVRDSTGAK APAGDIPAAA AAAAAASAAE
RRKRRRRKIT EVKGRGYADV YMDYEDDPDE PPIVEPRVAA SSRGAGAMGF TGTAPGAADA
RATGLTTLSP DAFGTGPVSP MLPGTWNPDS EPDQPAEGQE GGPRT
|
|---|
| |