| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0099 |
|---|
| Symbol | |
|---|
| ID | 4108870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 113073 |
|---|
| End bp | 114215 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638029225 |
|---|
| Product | acyl-CoA dehydrogenase-like protein |
|---|
| Protein accession | YP_637277 |
|---|
| Protein GI | 108797080 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTTG ACCGTCTGCT GCCCTCCGAC GAGGCGCGCG AGCTCATCGC GCTGACCCGT
GACATCGCCG ACAAGGTGCT CGACCCCATC GTCGACGAGC ACGAGAAGAC CGAGACCTAC
CCCGAGGGCG TCTTCGCCCA GCTGGGCGCG GCGGGGCTGC TGAGCCTGCC GCAGCCGGAG
GAGTGGGGTG GCGGCGGTCA ACCGTACGAG GTCTACCTGC AGGTGCTCGA GGAGATTGCG
GCGCGGTGGG CGGCGGTCGC GGTGGCGGTC AGCGTGCACA GCCTGTCGTC GCACCCGCTG
CTGGCCTTCG GCACCGACGA GCAGAAGCAA CGCTGGCTGC CCGGCATGCT GTCGGGCTCC
CAGATCGGCG CGTACAGCCT GTCCGAACCG CAGGCCGGTT CCGATGCGGC GGCATTGCGT
TGTGCGGCTG TGCCTTCCGA CGGTAAGTAC GTGATCACCG GTGAGAAGTC GTGGATCACC
CACGGCGGGA GGGCCGACTT CTACACGCTG TTCGCGCGAA CCGGCGAGGG GTCTCGCGGG
ATCAGCTGCT TCCTGATCCC CGGTGGCCAG CCCGGGCTGT CCTTCGGCAA GCCGGAGGAG
AAGATGGGTC TGCACGCGGT GCCGACGACG ACGGCGCACT ACGACGAGGC CCGCGTCGAC
GCCGACCGGC GCATCGGCGC GGAGGGTCAG GGTCTGCAGA TCGCGTTCTC CGCGCTGGAC
TCCGGACGGT TGGGTATCGC GGCGGTGGCC GTCGGTCTGG CGCAGGCCGC ACTCGACGAG
GCGACCCGCT ACGCCAACGA GCGAACCACG TTCGGCCGCA AGATCATCGA CCATCAGGGG
CTGGGTTTCC TGCTCGCCGA CATGGCCGCC GCCGTGGTCA GCGCCCGGGC CACCTACCTG
GATGCCGCGC GGCGGCGCGA CCTCGGCCTG CCGTACTCGA CCCAGGCCAG CGTCGCCAAG
CTGATCGCGA CGGATGCGGC GATGAAGGTG ACCACCGACG CGGTGCAGGT GCTCGGCGGC
GTCGGCTACA CCCGCGACTT CCGGGTCGAG CGCTACATGC GCGAAGCCAA GATCACGCAG
ATCTTCGAGG GCACGAACCA GATTCAGCGG CTGGTCATCT CGCGCTCGCT CACGGCACGC
TGA
|
|---|
| Protein sequence | MPVDRLLPSD EARELIALTR DIADKVLDPI VDEHEKTETY PEGVFAQLGA AGLLSLPQPE
EWGGGGQPYE VYLQVLEEIA ARWAAVAVAV SVHSLSSHPL LAFGTDEQKQ RWLPGMLSGS
QIGAYSLSEP QAGSDAAALR CAAVPSDGKY VITGEKSWIT HGGRADFYTL FARTGEGSRG
ISCFLIPGGQ PGLSFGKPEE KMGLHAVPTT TAHYDEARVD ADRRIGAEGQ GLQIAFSALD
SGRLGIAAVA VGLAQAALDE ATRYANERTT FGRKIIDHQG LGFLLADMAA AVVSARATYL
DAARRRDLGL PYSTQASVAK LIATDAAMKV TTDAVQVLGG VGYTRDFRVE RYMREAKITQ
IFEGTNQIQR LVISRSLTAR
|
|---|
| |