Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_0093 |
Symbol | |
ID | 4108864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 108026 |
End bp | 108637 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638029219 |
Product | haloacid dehalogenase, type II |
Protein accession | YP_637271 |
Protein GI | 108797074 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTGGCGT TCGACGTCTT CGGGACCGTC GTGGACTGGC GGTCCAGTGT CATCGCCCAA CTCGAGGAGT TCGGGCGTGC GCACGGGGTG GACGCCGACT GGGCGGCGTT CGCCGACGCC TGGCGGGCCG GCTATGTGCC GTCGATGGAC CGGGTGCGCC GCGGTGAGCT GCCGTGGACC CGACTCGACG ACCTGCACCG GATGACGCTC GTCGATCTGC TTGCCGCCGA GCACATCTCG GTCGGGGACG AGGCCGTCGA CGAGCTCACC CGGGCCTGGC ACCGGCTGGA CCCGTGGCCC GACAGCGTCG CGGGACTGAC GCGGCTCAAA CGCCGCTACG TCATCACCCC GCTGTCCAAC GGCAACGTGT CACTGCTGAC GAACATGGCC AAGCGGGCCG GGCTGCCATG GGACTGTGTC CTGTCGGCCG AGCTGTTCCG GCACTACAAA CCCGACCCCG AGGCCTATCT CGGCTGCGCC GACCTGCTCG ACGTCACCCC CGATGAGCTG ATGCTCGTCG CCGCGCACCG ATCCGATCTG CGCGCCGCAC GCGAGGCGGG TCTGCGCACC GCATACGTGT CCCGGCCACT GGAATACGGC CCCGGACGGT AG
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Protein sequence | MLAFDVFGTV VDWRSSVIAQ LEEFGRAHGV DADWAAFADA WRAGYVPSMD RVRRGELPWT RLDDLHRMTL VDLLAAEHIS VGDEAVDELT RAWHRLDPWP DSVAGLTRLK RRYVITPLSN GNVSLLTNMA KRAGLPWDCV LSAELFRHYK PDPEAYLGCA DLLDVTPDEL MLVAAHRSDL RAAREAGLRT AYVSRPLEYG PGR
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