Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_0080 |
Symbol | |
ID | 4108851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 92634 |
End bp | 94649 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638029206 |
Product | phosphotransferase system, fructose IIC component |
Protein accession | YP_637258 |
Protein GI | 108797061 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component [COG1445] Phosphotransferase system fructose-specific component IIB [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component [TIGR00848] PTS system, fructose subfamily, IIA component [TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0365787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAGTC CCACCGCATC GCCGATCATC ACCACCGATC TCGTGCTGCT CGACGTCGAC GCCGGCGGCG ACAAGGAAGC CGTGATCGGC CGCCTCGTCA ACCGGCTGGC CGACGCCGGG CGCAGCACCG ACGCCGACGG TCTGACACGC GCCGCGCTGG CCCGGGAGGA ACAGTCGGCG ACCGGCCTAC CCGGCGGCAT CGCGATCCCG CACTGCCGCT CCCCGTATGT CGACACCGCG ACGATCGGTT TCGCGCGCCT GACCCCCGGT GTGGACTTCG GAGCCCCCGA CGGGCCGGCC GACCTGGTGT TCCTGATCGC CGCACCGGAT TCCGGCGGCG CCGAGCACAT GAAGCTGCTG TCGAGCCTCG CGCGCGCCCT GGTGCGCAAG GAGTTCGTCG CCTCGCTGCG CGCGGCCGAG ACGTCCGAGG ACGTCGTCTC TCTGGTCGAG GACGTGGTCA ACCCGCAAGC GGCGGCACCG CCGCCGCCCG CCGCGGAGCC GGAACCGGCC AGGCAGCGCT CACTCGTCGC CGTCACCGCC TGCCCGACCG GCATCGCGCA CACCTACATG GCGGCCGATT CGCTGGCCGC CGCCGCGAAG AACGCCGGCG TCACGCTGCA TGTGGAGACC CAGGGTTCCT CGGGCAGCAC GCCGCTGTCG GACGCGACGA TCGCCGAAGC CGACGCGGTC ATCTTCGCCA CCGACGTGGG GGTGAAGGAC CGGCAGCGCT TCGCGGGCAA ACCCGTCGTC GCCTCGGGGG TCAAGCGGGC GATCAACGAA CCGGACAAGA TGGTCGCCGA CGCACTGGCC GCCGCGGACA ACCCCGACGC CGCCCGCGTC GAGGGTTCCG CCGGCGCCCC CTCGGCGGCG GCGCCCGCGG GTGATGTCGG CTGGGGCACG CGCACCCGGC AGATCCTGCT GACCGGTGTG AGCTACATGA TCCCGTTCGT CGCCGCGGGC GGTCTGCTGA TCGCGCTGGG CTTCCTGTTC GCGGGTTACG ACATCGCGAA TACGCCTGAC GGCCAGACGG ATTCACTCGG CAAGATCATC GCGACGACGA ACTCGCTGAC CAACCTGCCG TCCGGCGGGC TGATCCAGTA CCTCGGTGCG GTGCTGTTCA CGATCGGGAA CCTGGCGTTC TTCTTCCTGG TACCCGCGCT GGCCGGGTAC ATCGCGTTCG CCATCGCCGA CCGGCCCGGT ATCGCACCCG GCTTCGTCGC CGGTTACATC GCCACCACGG TGGGCGCCGG GTTCATCGGC GGCATCGTCG GCGGCCTGAT CGCCGGTTTC GCCGCGCTGT GGATCAGTCG GATCGGGGTA CCGCACTGGG CCCGCGGGCT GATGCCGGTG GTGATCATCC CGCTGTTCGC CTCACTGGTC GTGGGCCTGC TGATGTTCCT GCTGCTCGGC CGTCCGCTGG CGTGGCTCAC CACCAGCCTC ACCGACTGGC TCAACGGGCT GTCCGGTAGT TCGGTGATCG TGCTCGGCGT CATCCTCGGC TTGATGATGT GCTTCGATCT CGGCGGTCCG GTGAACAAGG CGGCGTACGC CTTCGCGACC ACCGGCCTCA ACGTGGCCGA CCCGGCGTCG CTGCGGATCA TGGCGGCGGT GATGGCCGCC GGGATGGTCC CGCCGCTGGC GATGGCGCTC GCCTCGACAG TGCGGCCCGG GTTGTTCACC GAGCCGGAGC GCGAAAACGG CCGCGCCGCA TGGCTGCTCG GGGCGTCGTT CATCTCCGAG GGCGCGATCC CCTTCGCGGC GGCCGACCCG CTGCGCGTCA TCCCGTCGAT GATGTTCGGC GGCGCCATCA CCGGTGCGCT GGTCATGGCG TTCGACGTCA CCTCCAAGGC GCCCCACGGC GGCATCTTCG TGTTCTTCGC GATCGGCAAC CTGGCGTGGT TCCTGGTCGC GCTCGCGGTG GGCACCGCGG CCGGCGCCGG CGCCGTCGTC GCGGCCAAGC AGTTCGCCAA ACCCGAAACG CCCGCCGACG CCAGCCCCGC ACTCGCCAAC GCCTGA
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Protein sequence | MSSPTASPII TTDLVLLDVD AGGDKEAVIG RLVNRLADAG RSTDADGLTR AALAREEQSA TGLPGGIAIP HCRSPYVDTA TIGFARLTPG VDFGAPDGPA DLVFLIAAPD SGGAEHMKLL SSLARALVRK EFVASLRAAE TSEDVVSLVE DVVNPQAAAP PPPAAEPEPA RQRSLVAVTA CPTGIAHTYM AADSLAAAAK NAGVTLHVET QGSSGSTPLS DATIAEADAV IFATDVGVKD RQRFAGKPVV ASGVKRAINE PDKMVADALA AADNPDAARV EGSAGAPSAA APAGDVGWGT RTRQILLTGV SYMIPFVAAG GLLIALGFLF AGYDIANTPD GQTDSLGKII ATTNSLTNLP SGGLIQYLGA VLFTIGNLAF FFLVPALAGY IAFAIADRPG IAPGFVAGYI ATTVGAGFIG GIVGGLIAGF AALWISRIGV PHWARGLMPV VIIPLFASLV VGLLMFLLLG RPLAWLTTSL TDWLNGLSGS SVIVLGVILG LMMCFDLGGP VNKAAYAFAT TGLNVADPAS LRIMAAVMAA GMVPPLAMAL ASTVRPGLFT EPERENGRAA WLLGASFISE GAIPFAAADP LRVIPSMMFG GAITGALVMA FDVTSKAPHG GIFVFFAIGN LAWFLVALAV GTAAGAGAVV AAKQFAKPET PADASPALAN A
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