Gene Mmcs_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_0080 
Symbol 
ID4108851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp92634 
End bp94649 
Gene Length2016 bp 
Protein Length671 aa 
Translation table11 
GC content71% 
IMG OID638029206 
Productphosphotransferase system, fructose IIC component 
Protein accessionYP_637258 
Protein GI108797061 
COG category[T] Signal transduction mechanisms
[G] Carbohydrate transport and metabolism 
COG ID[COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB
[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR01427] PTS system, fructose subfamily, IIC component
[TIGR00829] PTS system, fructose-specific, IIB component
[TIGR00848] PTS system, fructose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0365787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGTC CCACCGCATC GCCGATCATC ACCACCGATC TCGTGCTGCT CGACGTCGAC 
GCCGGCGGCG ACAAGGAAGC CGTGATCGGC CGCCTCGTCA ACCGGCTGGC CGACGCCGGG
CGCAGCACCG ACGCCGACGG TCTGACACGC GCCGCGCTGG CCCGGGAGGA ACAGTCGGCG
ACCGGCCTAC CCGGCGGCAT CGCGATCCCG CACTGCCGCT CCCCGTATGT CGACACCGCG
ACGATCGGTT TCGCGCGCCT GACCCCCGGT GTGGACTTCG GAGCCCCCGA CGGGCCGGCC
GACCTGGTGT TCCTGATCGC CGCACCGGAT TCCGGCGGCG CCGAGCACAT GAAGCTGCTG
TCGAGCCTCG CGCGCGCCCT GGTGCGCAAG GAGTTCGTCG CCTCGCTGCG CGCGGCCGAG
ACGTCCGAGG ACGTCGTCTC TCTGGTCGAG GACGTGGTCA ACCCGCAAGC GGCGGCACCG
CCGCCGCCCG CCGCGGAGCC GGAACCGGCC AGGCAGCGCT CACTCGTCGC CGTCACCGCC
TGCCCGACCG GCATCGCGCA CACCTACATG GCGGCCGATT CGCTGGCCGC CGCCGCGAAG
AACGCCGGCG TCACGCTGCA TGTGGAGACC CAGGGTTCCT CGGGCAGCAC GCCGCTGTCG
GACGCGACGA TCGCCGAAGC CGACGCGGTC ATCTTCGCCA CCGACGTGGG GGTGAAGGAC
CGGCAGCGCT TCGCGGGCAA ACCCGTCGTC GCCTCGGGGG TCAAGCGGGC GATCAACGAA
CCGGACAAGA TGGTCGCCGA CGCACTGGCC GCCGCGGACA ACCCCGACGC CGCCCGCGTC
GAGGGTTCCG CCGGCGCCCC CTCGGCGGCG GCGCCCGCGG GTGATGTCGG CTGGGGCACG
CGCACCCGGC AGATCCTGCT GACCGGTGTG AGCTACATGA TCCCGTTCGT CGCCGCGGGC
GGTCTGCTGA TCGCGCTGGG CTTCCTGTTC GCGGGTTACG ACATCGCGAA TACGCCTGAC
GGCCAGACGG ATTCACTCGG CAAGATCATC GCGACGACGA ACTCGCTGAC CAACCTGCCG
TCCGGCGGGC TGATCCAGTA CCTCGGTGCG GTGCTGTTCA CGATCGGGAA CCTGGCGTTC
TTCTTCCTGG TACCCGCGCT GGCCGGGTAC ATCGCGTTCG CCATCGCCGA CCGGCCCGGT
ATCGCACCCG GCTTCGTCGC CGGTTACATC GCCACCACGG TGGGCGCCGG GTTCATCGGC
GGCATCGTCG GCGGCCTGAT CGCCGGTTTC GCCGCGCTGT GGATCAGTCG GATCGGGGTA
CCGCACTGGG CCCGCGGGCT GATGCCGGTG GTGATCATCC CGCTGTTCGC CTCACTGGTC
GTGGGCCTGC TGATGTTCCT GCTGCTCGGC CGTCCGCTGG CGTGGCTCAC CACCAGCCTC
ACCGACTGGC TCAACGGGCT GTCCGGTAGT TCGGTGATCG TGCTCGGCGT CATCCTCGGC
TTGATGATGT GCTTCGATCT CGGCGGTCCG GTGAACAAGG CGGCGTACGC CTTCGCGACC
ACCGGCCTCA ACGTGGCCGA CCCGGCGTCG CTGCGGATCA TGGCGGCGGT GATGGCCGCC
GGGATGGTCC CGCCGCTGGC GATGGCGCTC GCCTCGACAG TGCGGCCCGG GTTGTTCACC
GAGCCGGAGC GCGAAAACGG CCGCGCCGCA TGGCTGCTCG GGGCGTCGTT CATCTCCGAG
GGCGCGATCC CCTTCGCGGC GGCCGACCCG CTGCGCGTCA TCCCGTCGAT GATGTTCGGC
GGCGCCATCA CCGGTGCGCT GGTCATGGCG TTCGACGTCA CCTCCAAGGC GCCCCACGGC
GGCATCTTCG TGTTCTTCGC GATCGGCAAC CTGGCGTGGT TCCTGGTCGC GCTCGCGGTG
GGCACCGCGG CCGGCGCCGG CGCCGTCGTC GCGGCCAAGC AGTTCGCCAA ACCCGAAACG
CCCGCCGACG CCAGCCCCGC ACTCGCCAAC GCCTGA
 
Protein sequence
MSSPTASPII TTDLVLLDVD AGGDKEAVIG RLVNRLADAG RSTDADGLTR AALAREEQSA 
TGLPGGIAIP HCRSPYVDTA TIGFARLTPG VDFGAPDGPA DLVFLIAAPD SGGAEHMKLL
SSLARALVRK EFVASLRAAE TSEDVVSLVE DVVNPQAAAP PPPAAEPEPA RQRSLVAVTA
CPTGIAHTYM AADSLAAAAK NAGVTLHVET QGSSGSTPLS DATIAEADAV IFATDVGVKD
RQRFAGKPVV ASGVKRAINE PDKMVADALA AADNPDAARV EGSAGAPSAA APAGDVGWGT
RTRQILLTGV SYMIPFVAAG GLLIALGFLF AGYDIANTPD GQTDSLGKII ATTNSLTNLP
SGGLIQYLGA VLFTIGNLAF FFLVPALAGY IAFAIADRPG IAPGFVAGYI ATTVGAGFIG
GIVGGLIAGF AALWISRIGV PHWARGLMPV VIIPLFASLV VGLLMFLLLG RPLAWLTTSL
TDWLNGLSGS SVIVLGVILG LMMCFDLGGP VNKAAYAFAT TGLNVADPAS LRIMAAVMAA
GMVPPLAMAL ASTVRPGLFT EPERENGRAA WLLGASFISE GAIPFAAADP LRVIPSMMFG
GAITGALVMA FDVTSKAPHG GIFVFFAIGN LAWFLVALAV GTAAGAGAVV AAKQFAKPET
PADASPALAN A