Gene Mmcs_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_0007 
Symbol 
ID4108932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp8234 
End bp12007 
Gene Length3774 bp 
Protein Length1257 aa 
Translation table11 
GC content65% 
IMG OID638029130 
ProductDNA gyrase subunit A 
Protein accessionYP_637185 
Protein GI108796988 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01445] intein N-terminal splicing region
[TIGR01063] DNA gyrase, A subunit
[TIGR01443] intein C-terminal splicing region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.231135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATA CCACGTTGCC TCCTGGCGAC GAAGCCGGAG ACCGCATCGA ACCGGTCGAC 
ATCCAGCAGG AGATGCAGCG CAGCTACATC GACTACGCGA TGAGCGTTAT CGTCGGGCGT
GCGCTGCCCG AGGTGCGTGA CGGCCTCAAG CCGGTGCACC GCCGCGTGCT CTACGCGATG
TTCGACTCCG GCTTCCGTCC GGACCGTGGA CACGCGAAAT CCGCACGCTC CGTTGCCGAG
ACGATGGGTA ACTACCACCC GCACGGGGAC TCCTCGATCT ACGACACCCT GGTCCGCATG
GCGCAGCCGT GGTCGCTGCG CTACCCGTTG GTCGACGGGC AGGGCAACTT CGGCTCGCCG
GGTAACGATC CGCCGGCCGC GATGCGGTAC TGCGTCACCG GTGATGCGTT GGTTCGCTTG
CCGCTCGGGC AGTCCGTACG GATCGATGGC GTGGTACCGG GAGCGAAGCC CAACTCGGAT
AACCCAATCG ATCTCAAGGT CGTCGACCGC CACGGCGATC CCGTGGCCGC CGATCGGCTT
TTCCACTCGG GTGAGCACCA GACATACAAG GTGACCACTA CTGAGGGGTA CACGGTCACG
GGCACTGAGA ACCATCCGCT GCTCTGTCTT GTGGATGTGG GTGGGGTCCC GACCCTGCTG
TGGAAGCTGG TCGAAGAGAT CCGGCCCGGC GACACTGTGG TCCTTCAGCG GTCTCAACCG
ATGGAGTTTG GTCCTGCCGA TTGGCAAGAG ACGCTGGAGG CGCTCCTCGC AGGCGCGTTC
ATCAGCGAGG GGTTCATCTC GGAGAAGCGA GCGGGTTTCA ACAACCTCGA TCGAGACTTC
TTCAACATGG TGGTCGCTGC GTACGACGCG GTTGTCGGCG GCCGGCGGTA CGTCTCGAGT
CGCACGATTG CGTCCGGCTC GCTGCTGCAC GAATTGGACA TCCACAATCT CGAGTCATTG
CGCAGGTCTC GCCTAGGTGT CGCAGTCGGT CAGCGGTCGG CGGACAAGTT CGTGCCGGAG
TGGATCTGGC AGTCTCCGGC CGCCGTCAAA CGGGTCTTCC TTCAGGCGTT GTTCGAAGGC
GACGGCTCAT GTTCGCGCTT GCCCCGTAAC ACAATCCAGG TGTCATATTC GACTCGCAGT
GAGCGATTGG CAGCTGACGT CCAGCAGATG CTGCTGGAAT TCGGCATCGT GTCGCGGCGG
TATCGCCACG CGGTGGGTGA ATACAAGGTG GCGCTCACGA ATCGCGCTCA GGCAGAGCTC
TTCGCCCGCC AGATCGGCTT CGGCGGAGCG AAGCAAGTGA AGTTGCTCGA GATCCTGAGC
GCGCTTCCGG AAGAAGCTGC TGGGCTCGAC CGGGACTTCG TGCCGGGCTT GGCGCGTTTC
ATTCGTCAGC ACAGTGGCGG ACGGTGGGCC GACAAGGAAT GGCTCCGTAA GCACAACGTC
GATCGCATCT CACGATGGCA GCGGAACGGG GCCGAAATCC TCGGTCGGAT CGCAGACCCG
GAAGTGCGTG CCGTCGCGAC CGATCTGACC GACGGCAGGT TCTACTACGC CACGGTGGCG
TCGGTCGCCG ACGCCGGTGT CCAACCTGTG TACAGCCTGC GCGTCGACAC CGAAGACCAC
GCATTCATCA CGAATGGCTT TGTCAGCCAC AACACCGAGG CGCGGCTGAC CCCGCTCGCG
ATGGAGATGT TGCGTGAAAT CGACGAGGAG ACAGTCGATT TCATTCCAAA CTACGACGGC
CGGGTGCAGG AGCCGACCGT CCTGCCGAGC CGGTTCCCGA ACCTGCTGGC CAACGGTTCG
GGCGGGATCG CGGTCGGTAT GGCGACCAAC ATCCCACCGC ACAACCTGCG CGAGCTGGCC
GACGCCGTCT ATTGGTGCCT GGAGAATTTC GAGGCCGACG AGGAGACGAC GCTCGCCGCG
GTGATGGAAC GCGTCAAGGG TCCGGACTTC CCCACCCACG GTCTCATTGT GGGCAGCCAG
GGCATCGAGG ACACGTACAA GACCGGGCGC GGCTCGGTGA AGATGCGCGG CGTCGTCGAG
ATCGAAGAGG ACAGCCGCGG GCGGACCGGC ATCGTCATCA CCGAATTGCC GTATCAGGTC
AACCACGACA ACTTCATCAC CTCGATCGCC GAGCAGGTCC GCGACGGCAA GCTGGCCGGC
ATCTCGAACA TCGAGGACCA GTCCAGTGAC CGTGTCGGCC TGCGCATCGT CGTCGAACTC
AAGCGCGACG CCGTGGCCAA GGTCGTGCTG AACAACCTCT ACAAGCACAC CCAGCTGCAG
ACCAGCTTCG GGGCCAACAT GCTGTCGATC GTCGACGGTG TCCCCCGCAC GCTGCGTCTC
GACCAGATGA TCCGCTACTA CGTGGAACAT CAGCTCGACG TGATCGTGCG GCGCACCCGG
TACCGGCTGC GCAAGGCGAA CGAGCGGGCC CACATCCTGC GCGGTCTGGT CAAGGCGCTC
GACGCCCTCG ACGAGGTCAT CGCGTTGATC CGCGCATCGC AGACCGTCGA CATCGCGCGG
GCCGGCCTGA TCGAGCTGCT CGACATCGAC GAGATCCAGG CCCAGGCGAT CCTCGACATG
CAGCTGCGGC GCCTGGCCGC CCTGGAGCGT CAGCGCATCG TCGACGACCT GGCCAAGATC
GAAGCCGAGA TCGCCGACCT CGAGGACATC CTCGCCAAGC CGGAACGTCA GCGCGCGATC
GTGCGTGACG AGCTCAAGGA GATCGCCGAC AAGTACGGCG ACGACCGCCG GACCCGCATC
GTGCCCGCAG ACGGTGAGGT CAGCGACGAG GATCTGATCG CCCGCGAGGA CGTCGTCGTC
ACGATCACCG AGACCGGATA CGCCAAACGC ACCAAGACCG ACCTCTACCG CAGCCAGAAG
CGCGGCGGCA AGGGTGTGCA GGGCGCCGGC CTCAAGCAGG ACGACATCGT CAACCACTTC
TTCGTCTGCT CCACCCACGA CTGGATCCTG TTCTTCACCA CCCAGGGCCG GGTGTACCGG
GCGAAGGCCT ACGAGTTGCC GGAGGCGTCC CGCACGGCGC GCGGTCAGCA CGTCGCGAAC
CTGCTGGCCT TCCAGCCCAA CGAGCGCATC GCGCAGGTCA TCCAGATCAA GAGCTACGAG
GACGCGCCGT ATCTGGTGTT GGCCACCCGC AACGGTCTGG TGAAGAAGTC GCGGTTGACC
GACTTCGACT CCAACCGGTC CGGCGGCATC GTCGCGGTGA ACCTGCGCGA CGGTGACGAA
CTGGTCGGAG CCGTGCTCTG CTCGTCCGAG GACGACCTCC TGCTGGTGTC GGCCAAGGGC
CAGTCGATCC GGTTCTCCGC CACCGACGAG GCGCTGCGGC CGATGGGCCG CGCGACCTCC
GGTGTGCAGG GCATGCGGTT CAACGCCGAC GACGAACTGC TGTCCCTCAA CGTGGTGCGA
CCGGACACCT ACCTGCTGGT GGCGACCAGC GGTGGCTACG CCAAGCGCAC CTCGATCGAG
GAGTACACCG CGCAGGGTCG AGGCGGAAAG GGCATCCTGA CGATCCAGTA CGACCGCCGA
CGTGGCAATC TTGTCGGGGC GTTGATCGTC GATGACGACA CGGAGTTGTA CGCGATCACC
TCGGGTGGAG GTGTCATCCG GACGGCTGCC CGCCAGGTCC GCAAGGCCGG GCGACAGACG
AAGGGCGTTC GGTTGATGAA CCTGGGTGAG GGCGACACAC TGATTGCCAT CGCGCGCAAC
GCCGAGGCGG GCGACAGCAC CGACGAGGTC AACACCGACC CGGATGCGGT CTGA
 
Protein sequence
MTDTTLPPGD EAGDRIEPVD IQQEMQRSYI DYAMSVIVGR ALPEVRDGLK PVHRRVLYAM 
FDSGFRPDRG HAKSARSVAE TMGNYHPHGD SSIYDTLVRM AQPWSLRYPL VDGQGNFGSP
GNDPPAAMRY CVTGDALVRL PLGQSVRIDG VVPGAKPNSD NPIDLKVVDR HGDPVAADRL
FHSGEHQTYK VTTTEGYTVT GTENHPLLCL VDVGGVPTLL WKLVEEIRPG DTVVLQRSQP
MEFGPADWQE TLEALLAGAF ISEGFISEKR AGFNNLDRDF FNMVVAAYDA VVGGRRYVSS
RTIASGSLLH ELDIHNLESL RRSRLGVAVG QRSADKFVPE WIWQSPAAVK RVFLQALFEG
DGSCSRLPRN TIQVSYSTRS ERLAADVQQM LLEFGIVSRR YRHAVGEYKV ALTNRAQAEL
FARQIGFGGA KQVKLLEILS ALPEEAAGLD RDFVPGLARF IRQHSGGRWA DKEWLRKHNV
DRISRWQRNG AEILGRIADP EVRAVATDLT DGRFYYATVA SVADAGVQPV YSLRVDTEDH
AFITNGFVSH NTEARLTPLA MEMLREIDEE TVDFIPNYDG RVQEPTVLPS RFPNLLANGS
GGIAVGMATN IPPHNLRELA DAVYWCLENF EADEETTLAA VMERVKGPDF PTHGLIVGSQ
GIEDTYKTGR GSVKMRGVVE IEEDSRGRTG IVITELPYQV NHDNFITSIA EQVRDGKLAG
ISNIEDQSSD RVGLRIVVEL KRDAVAKVVL NNLYKHTQLQ TSFGANMLSI VDGVPRTLRL
DQMIRYYVEH QLDVIVRRTR YRLRKANERA HILRGLVKAL DALDEVIALI RASQTVDIAR
AGLIELLDID EIQAQAILDM QLRRLAALER QRIVDDLAKI EAEIADLEDI LAKPERQRAI
VRDELKEIAD KYGDDRRTRI VPADGEVSDE DLIAREDVVV TITETGYAKR TKTDLYRSQK
RGGKGVQGAG LKQDDIVNHF FVCSTHDWIL FFTTQGRVYR AKAYELPEAS RTARGQHVAN
LLAFQPNERI AQVIQIKSYE DAPYLVLATR NGLVKKSRLT DFDSNRSGGI VAVNLRDGDE
LVGAVLCSSE DDLLLVSAKG QSIRFSATDE ALRPMGRATS GVQGMRFNAD DELLSLNVVR
PDTYLLVATS GGYAKRTSIE EYTAQGRGGK GILTIQYDRR RGNLVGALIV DDDTELYAIT
SGGGVIRTAA RQVRKAGRQT KGVRLMNLGE GDTLIAIARN AEAGDSTDEV NTDPDAV