Gene Mmcs_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_0004 
SymbolrecF 
ID4108929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp4241 
End bp5383 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content70% 
IMG OID638029127 
Productrecombination protein F 
Protein accessionYP_637182 
Protein GI108796985 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCGTCC GGCATCTGAC GCTGACCGAC TTCCGGTCCT GGGCGCGCGC CGATCTGGAG 
TTGGAGCCCG GCCGTACCGT CTTCGTCGGC CCCAACGGTT TCGGCAAGAC GAATCTCGTT
GAGGCGCTGT GGTATTCGGC AACGCTCGGC TCACACCGAG TGGCCTCGGA CGCACCGCTC
ATCCGGGTCG GCGCACCGCG CGCGGTGGTG TCGACCATCG TGGTGAACGA AGGTCGCGAG
TTGGCGGTCG ACCTCGAGAT CACCACCGGC CGGGCGAACA AGGCGCGGCT CAACCGTTCA
CCGGTGCGCA GCCCCCGGGA AGTGCTCGGG GTGCTGCGTG CGGTGCTGTT CGCCCCCGAG
GATCTGGCGC TGGTGCGCGG CGACCCGGGC GAACGCCGCC GCTATCTCGA CGAACTCGCC
ACCACCCGTC GCCCGAGCAT CGCCGGCGTA CGCGCCGACT ACGACCGGGT CATCCGGCAG
CGCACCGCAC TGCTGAAGAG CGCCGCGGGG GCCCGGTACC GGGGAGACCG CAGCGTTCTC
GAGACCCTCG ACGTGTGGGA TGGGCACCTC GCCGCGCACG GTGCGTTGTT GATGGCCGCG
CGCGCCGACC TCGTGCACCA CTTGGCGCCG GAGGTCGAGA AGGCCTATCA ACTCCTGGCG
CCGGGGTCGC GGCCGGCGGC CATCCGGTAC CGCACCAGCA TCGATGCCGA AGACGATGTC
AGCGCCGAGT ACTACGAGGC CGCCCTGCTC GACGCGATGA CCCGCCGGCG CGACGCCGAA
CTCGAACGCG GGGTCTGCCT GGTCGGCCCG CACCGGGACG ACCTGGAGTT GCGGCTCGGT
GACCAGATGG CGAAAGGCTA TGCCAGCCAT GGGGAGTCGT GGTCGATGGC GTTGTCGCTG
CGGTTGGCCG CCTATGAGCT GTTGCGAACC GACGGCAGCG ATCCGGTCCT CCTGCTCGAT
GACGTGTTCG CCGAACTGGA CGCCGCCCGG CGGCGCGCCC TGGCCGAGGT CGCAGCGTCC
GCGGAGCAGG TGCTGGTCAC CGCGGCGGTC GCCGAGGACA TCCCCGCCGA CTGGGATGCG
CGGCGGATCA TGATCCGGAT GCAGGACGAC GACGATGGGC GCGTATCGAT GGTGGAGTCA
TGA
 
Protein sequence
MFVRHLTLTD FRSWARADLE LEPGRTVFVG PNGFGKTNLV EALWYSATLG SHRVASDAPL 
IRVGAPRAVV STIVVNEGRE LAVDLEITTG RANKARLNRS PVRSPREVLG VLRAVLFAPE
DLALVRGDPG ERRRYLDELA TTRRPSIAGV RADYDRVIRQ RTALLKSAAG ARYRGDRSVL
ETLDVWDGHL AAHGALLMAA RADLVHHLAP EVEKAYQLLA PGSRPAAIRY RTSIDAEDDV
SAEYYEAALL DAMTRRRDAE LERGVCLVGP HRDDLELRLG DQMAKGYASH GESWSMALSL
RLAAYELLRT DGSDPVLLLD DVFAELDAAR RRALAEVAAS AEQVLVTAAV AEDIPADWDA
RRIMIRMQDD DDGRVSMVES