Gene Mmcs_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_0003 
Symbol 
ID4108928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp3295 
End bp4188 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content69% 
IMG OID638029126 
Product6-phosphogluconate dehydrogenase-like protein 
Protein accessionYP_637181 
Protein GI108796984 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1023] Predicted 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTGG GTCTGGTGGG GCTCGGCAAG ATGGGCTTCA ACATGCGGGA ACGCCTTCGC 
GAAGGCGGAC ACGAAGTCGT CGGCTTCGAT CCCCGGCCCG AGGTGACCGA CGTCCCGTCG
CTCGCCGCGC TGGCCGACGC GCTGGCCCCG CCCAGGGTGG TGTGGGTGAT GGTGCCGTCC
GGTCCGGTCA CGCACGACAC GATCGTGTCG CTCGCCGAGG TGCTGGGTGA GGGCGACCTG
GTGATCGACG GCGGCAACTC CCGCTTCACC GAGGACGCTC CGCACGCAGA GCTGTTGAAA
GCCAAGGGAA TCGGCTTCAT CGACGCGGGT GTGTCCGGCG GTGTCTGGGG GCTGGCGGAG
GGGTATGGCC TGATGGTCGG CGGCGACGAC GCCGACATCG AGCGGGTCAT GCCGATCTTC
GACACCCTGC GCCCCCCGGG TGACCGGGCG GACGGGTTCG TCCACGCGGG ACCCGTCGGC
GCGGGTCATT TCGCCAAGAT GGTGCACAAC GGCGTCGAGT ACGCGTTGAT GACCGCCTAC
GGCGAGGGTT ATGAGTTGTT GGCCGCCGAG GAGTTGATCC GCGATCCGCA GGCGGTGTAC
CAGGCCTGGA CGAACGGCAC GGTGGTCCGG TCATGGCTGC AGCAGCTGCT CGCCAAGGCC
CTCCGGGAGG ATCCCGGCCT GGCCGAGATC TCCGGCTACA CCGAGGATTC CGGCGAAGGC
CGGTGGACGG TCGAGGAGGC GATCCGCCTC CGCGTGCCGG TGCCGTCCAT CGCGGCATCG
CTGTTCGCGC GGTTCGAATC GCGCCAGGAG GACTCCCCCA CCATGAAGGC AGTCTCGGCG
TTGCGGAACC AGTTCGGCGG GCACGCCGTC CAGAGGATCA GCAAGTCGGG GTAG
 
Protein sequence
MQLGLVGLGK MGFNMRERLR EGGHEVVGFD PRPEVTDVPS LAALADALAP PRVVWVMVPS 
GPVTHDTIVS LAEVLGEGDL VIDGGNSRFT EDAPHAELLK AKGIGFIDAG VSGGVWGLAE
GYGLMVGGDD ADIERVMPIF DTLRPPGDRA DGFVHAGPVG AGHFAKMVHN GVEYALMTAY
GEGYELLAAE ELIRDPQAVY QAWTNGTVVR SWLQQLLAKA LREDPGLAEI SGYTEDSGEG
RWTVEEAIRL RVPVPSIAAS LFARFESRQE DSPTMKAVSA LRNQFGGHAV QRISKSG