| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6526 |
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| Symbol | |
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| ID | 4096494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008062 |
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| Strand | - |
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| Start bp | 1168630 |
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| End bp | 1172223 |
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| Gene Length | 3594 bp |
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| Protein Length | 1197 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638019811 |
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| Product | YadA-like |
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| Protein accession | YP_626358 |
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| Protein GI | 107029263 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures |
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| COG ID | [COG5295] Autotransporter adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.542717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGGA AGCAGATTTC GGCGCTCGCC GCCGCGATGT TCACGGGTGC GGGTGTGCTG
ATCGCCGGCG CCGCCCATGC GGACAATTTC GTCGACCGCG GCAACCCCGA CAACGCGCTG
AACGGCCAGT GTATCGACGG CACCAACCCG CTATGCGTGG CAACGAAGAA CGGCAGTTAC
GTGGCGGTCA GCACCGCGAA CGTGACGCAG GGCACCAATG CGAAGGCCGG CACCAGCGGC
ATCGCGATCG GCGACCAGTC GAATGCGAGC AGCAAGGGCG GCACCAGCAG CGGCGGCGCG
ATCGCGATCG GCGTCGGTTC GCAGGCGCTG GCGAACTCGG CCACCGCGAT CGGCACGGTG
GCGGTCGCGC AGGGTAATAC CGCGCTGGCA ATCGGCCGTC AGTCGGCGGC GGTCGGCGAT
TTCTCGATGG CGCTCGGCAA CGTCGCGGAT GCGCACGGCA CGAGTTCGAT CGCGCTCGGC
CACTCGGCGC TCGCCAGCGG CGACCGCTCG GTCGCGATCG GCGGCGCGAA CCCGACGTCG
AGCGACGGCG TATCGGCCGG CGCATCGTAC GACGCGGCGA CGCAGACGCG TGCCGGCGGC
ACGCAGTCGG TGGCGATCGG CGCCGGCGCG CAGACGAACG ACAACAACCA GGTGGCGATC
GGCTCGGGCA GCGTCGGCGC GAACAACGGC GGCACGCCGG TGTTCGGCGG CACGGCCGCA
CCGGTCGGCG GCGCGGTGTC GTTCGGCGCG CTCGGCAGCG AACGCCAGCT CAAGAACGTC
GCGGCGGGCG CGGCCGATAC GGATGCCGTC AACGTCCAGC AACTGAAGAA CGTGAACAGT
ACGCTGAGCA CGGGCATCGG CAACGTCGAT GCACGCGTGA CGTCGGTCGG CAATTCGCTG
TCAACCACGA TCTCGAACGT CGACCAGCGC GTGACCAGCG TCGGCAACAG CCTCAGCACG
AGCATCGTCA CGGCCACCAA GAACGTCGTC AAATACACCG ACGACTCGCA TGCGGCGATC
GCGCTCGACG GCGCCGCCGG CACGACGATC GGCGGCGTGG CAGCGGGCGT GGCCGATACC
GACGCGGTCA ACGTCGGTCA GTTGAAGGGT AGCCTCACGC CGCTGCAAAC GTCCATTTCG
ACGGCGGCGT CGAACATCAC GAACCTGCAG AACAGCGTGA CCGGCATCAA CGGCTCGCTG
AGCACGGCGG CCTCGAACAT CGCCGGCCTG CAGGCGGCCG ATACGCGCAA CGTCAAGTAC
GACGGCGCGA GCGGCTTCGA CTCGGTGACG TTCGCCGGCC CCAACGGCAC GACGCTGCAC
AACGTCGCGG ACGGCAAGGA CGCGCACGAC GCCGTCAACG TCGGCCAGTT GAACGGCGGC
CTTGCATCGC TCAGCACGAG CGTGACGAAC AACCTCAGCA CGACGCTCGG CAACCTGAGC
ACGTCGATCA CCAGCCAGAT CGGCAACGCG ACGAAGAATG CGGTGCAGTA CGACGACGAT
GCGCATGGCG GCGTCACGCT CGGCGGCAAG GGCGCAACGG CGCCGGTCGG CCTGCACAAC
GTCGCGGATG GCGTGGCGGC GGGCGATGCC GTGAACGTCG GCCAGCTCGG CAAGGCGACC
GACGCGCTCA ACCAGTCGAT CACGACCGTC GGCAACCAGG TGACGACGAA TACCGGCAAC
ATCGCGGCGC TCCAGCAGGA CGCGCTGCAA TGGAACCCGG GCCTCGGCGC GTACGATGCG
AGCCACGGCG GCCACGGCCC GCAGCTGATC AGCAACGTCG CGGCCGGCAA GAGCGGCACC
GACGCGGTCA ACGTCGATCA ATTGAACGCG GCGATTCACG ACGGCACGAG CCAGCTCGAC
GCGCTCGCCG TGAAATACGA CGATGCGAGC AAGCAGCAGG TATCGCTCGG TGCAGGCAAC
GGCGGCAATC CGGTGCGCGT GACCAACGTC GCGGCAGGCA ACGTCGCGGC CGGCAGTACC
GACGCGGTGA ACGGCGCGCA ACTGCGGCGC GCGACCGACG GCACCGCGGC CGCGCTCGGC
GGCGGCGCGA CGGCGAACCC GGACGGCTCG ATCGGCGCAC CGAACTACAA GATCGGCGGC
AGTGCGTTCA ACAACGTCGG CGACGCGCTG ACGAACCTCG ACGGCCGGGT CGGCAGCAAC
ACGACGACGC TCGCGAATCA CGAAACGCGC ATCGACAATG CCGAAACGAA TATCGCGGGC
AACACGGCGG CGATCGCCGG GCTGCAACAG GATGCACTGC AATTCGACCC GACGCTCGGC
GCGTTCAACG CCGCGCGCGG CAGTGCGCCG ACGAAGCTGA CCAACGTGGC CGACGGCAAC
GTCGCCGCGG GCAGCACGGA TGCGGTCAAC GGCGGCCAGT TGTCCGGCGT GAAGACCACG
CTCGAACAGC AGATCACCAA CGTGTCGAAC CAGGCCGGCG AAGCGGTGAA GAACGTCGTC
AAGTACGACG TCGACGCGAG CGGCAACCGG CTGAATTCGG TGTCGCTCGT CGGCGGCGAC
GCCACCTCGG CCGTCGTGCT GAAGAACGTC GCGGCGGGCA CCAGCGATAC CGACGCGGTG
AACGTGAAGC AGTTGAAGGA CGTGCAGTCG AACCTGAACC AGCTCGGCGC GCTCGCGGTG
CAGTACGACG ACAGCTCGAA GAGCACGATC ACGCTCGGCG GCGCGGGCGG CACGCGCATC
ACCAACGTGC AGGCCGGCAC GCTGAGCGCC ACCAGCACCG ACGCGGTGAA TGGCTCGCAG
CTCTATGCGA CCAACCAGCA GGTGTCGAAG AACACCACCG ACATTTCCAA CCTGCAAGGC
AGCGTGACCA ACATCGCGAA CGGCAAGGCC GGCCTCGTGC AGCAGCAGGA CCCGAACGGC
GCGATCACGG TCGGAAAGGA TTCGGGCGGC ACCAGCGTGA ACTTCTCCGG TACGGCGGGC
GACCGCGTGC TGACCGGCGT CGCGGCGGGC GTGAACGCGA ACGACGCGGT CAACGTGGGC
CAGTTCAACG CCGCGCTGCA GAACGTCGCG GCCAACGACA AGATCCGCGC GGCCGCGACC
GATGCGAACA CCACGTGGAT CGCGCGCGCC GATGCGGGGG CGATCGGCTC GACGGCGACC
GCAACCGGCA AGAATGCGGT GGCCGTTGGC CAGGGCTCCG TCGCCGATCG CGACAACTCG
TTCTCGGTCG GCGCGAAGGG CAGCGAGCGC CAGATCACGA ACGTCGCGGC CGGCACGGCG
CCGACCGACG CGGTGAACGT GCAGCAGCTG AACGACAACC TCGCGACGGC GTCGACGCAG
GCGAAGGGGT ATACCGACCA GCGCATCGGG CAGGTGTACA ACTCGTTCAA CGACCTGAAG
AAGGACATGT ACGGCGGTGT CGCGTCGGCG ATGGCGGTGG CCGGCTTGCC GCAGCCGACC
GGCGCGGGGC GCTCGATGGT GTCGGCGGCG ACGTCGAACT ATCACGGCCA GCAAGGCTTC
GCGGCCGGCT ACTCGTACGT GACGGAGAGC AACCGCTGGG TCGTCAAGGC ATCGGTGACG
GGCAACACGC GCTCGGACTT CGGCGCAGTG GTCGGCGCGG GTTATCAGTT CTGA
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| Protein sequence | MKRKQISALA AAMFTGAGVL IAGAAHADNF VDRGNPDNAL NGQCIDGTNP LCVATKNGSY
VAVSTANVTQ GTNAKAGTSG IAIGDQSNAS SKGGTSSGGA IAIGVGSQAL ANSATAIGTV
AVAQGNTALA IGRQSAAVGD FSMALGNVAD AHGTSSIALG HSALASGDRS VAIGGANPTS
SDGVSAGASY DAATQTRAGG TQSVAIGAGA QTNDNNQVAI GSGSVGANNG GTPVFGGTAA
PVGGAVSFGA LGSERQLKNV AAGAADTDAV NVQQLKNVNS TLSTGIGNVD ARVTSVGNSL
STTISNVDQR VTSVGNSLST SIVTATKNVV KYTDDSHAAI ALDGAAGTTI GGVAAGVADT
DAVNVGQLKG SLTPLQTSIS TAASNITNLQ NSVTGINGSL STAASNIAGL QAADTRNVKY
DGASGFDSVT FAGPNGTTLH NVADGKDAHD AVNVGQLNGG LASLSTSVTN NLSTTLGNLS
TSITSQIGNA TKNAVQYDDD AHGGVTLGGK GATAPVGLHN VADGVAAGDA VNVGQLGKAT
DALNQSITTV GNQVTTNTGN IAALQQDALQ WNPGLGAYDA SHGGHGPQLI SNVAAGKSGT
DAVNVDQLNA AIHDGTSQLD ALAVKYDDAS KQQVSLGAGN GGNPVRVTNV AAGNVAAGST
DAVNGAQLRR ATDGTAAALG GGATANPDGS IGAPNYKIGG SAFNNVGDAL TNLDGRVGSN
TTTLANHETR IDNAETNIAG NTAAIAGLQQ DALQFDPTLG AFNAARGSAP TKLTNVADGN
VAAGSTDAVN GGQLSGVKTT LEQQITNVSN QAGEAVKNVV KYDVDASGNR LNSVSLVGGD
ATSAVVLKNV AAGTSDTDAV NVKQLKDVQS NLNQLGALAV QYDDSSKSTI TLGGAGGTRI
TNVQAGTLSA TSTDAVNGSQ LYATNQQVSK NTTDISNLQG SVTNIANGKA GLVQQQDPNG
AITVGKDSGG TSVNFSGTAG DRVLTGVAAG VNANDAVNVG QFNAALQNVA ANDKIRAAAT
DANTTWIARA DAGAIGSTAT ATGKNAVAVG QGSVADRDNS FSVGAKGSER QITNVAAGTA
PTDAVNVQQL NDNLATASTQ AKGYTDQRIG QVYNSFNDLK KDMYGGVASA MAVAGLPQPT
GAGRSMVSAA TSNYHGQQGF AAGYSYVTES NRWVVKASVT GNTRSDFGAV VGAGYQF
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