Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6483 |
Symbol | |
ID | 4097315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 1120615 |
End bp | 1121670 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638019770 |
Product | porin |
Protein accession | YP_626317 |
Protein GI | 107029222 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0517462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGGT GGTTCCGGAT GGCGGCATGG TGCGGCTGCA GTGCCGTCGC ACCGGCGTTC GCGCAATCGA GCATGACGCT CTATGGGTCG CTGGACACGG GCGTGACCTA TACGAGCGAC GTGGCGTCCG CCCCGCGAGG CGGGCGTCAG CTCGCGTTGC AGGCCGGCGT GTCGCGCAAC GACGTGTGGG GCCTGACGGG TAGGGAGGAT CTCGGCGGCG CCAACTTCGC GGTGTTCCGG CTGGAGAGCC AGTTCCAGAC GTCGGACGGC GCGCTGACCG TACCGGGCTC CGCGTTCAGT TCACAAGCGT ACGTCGGGCT CGGCGGTGAC TGGGGGACCG TGACGCTCGG GCGCCAGTTC GATTTCGTCG GCGATCTGCT GCCGGCCTTC GCGATTGGCG CAAACACGCC GGCTGGCCTG CTCGCGTGGG GATTGCCGAC GAACGCGTCG GCGGGCGGTG CGCTCGACAA CCGCGTGTGG GGCGTCCAGG TGAACAATGC GGTGAAGTAC GTGAGCCCGA CATTCGGCGG GGTCGCGTTC GGCGGCATGT GGGGATTCGG CAACGTGCCC GGCACGGTCG CACGCAGCAG CGTGCAAAGC GCGATGCTGT CCTACACGCA AGGCGCGTTC AGCGCCGCGC TCGCGTATTT CGGCCAGCAT GACGTGACCG CCGGCGGCAA TCTGCGCAAC TTTTCGGGCG GTGCCGGCTA CAACGTCGGG CCGTTTCGTG TCTTCGGGAT GGTGTCGGAC GTCCGGATCA GCGCCGCCGC GCCGTTGCGG GCCACCACCT ATGACGCCGG GTTGACCTAT GCCGTCACGC CGTCGTTGCA GCTGGGCGGC GGTTTCCAGT ACCAGCAGCG CGGCGGCGAT ATCGGCTCGG CCAACCAGGT CACGTTGAGC GCCGACTATT CGCTGTCGAA ACGTACCGGC CTTTACGCGG TATTCGCACG CGGGCACGAC AGCGCGTATG GCGCGCAGGT CGAAGCGGCG CTCGGCGGGG CGGCGTCCGG CTCGACGCAG ACCGCCGTTC GGCTCGGGCT GCGGCATCAG TTCTGA
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Protein sequence | MKGWFRMAAW CGCSAVAPAF AQSSMTLYGS LDTGVTYTSD VASAPRGGRQ LALQAGVSRN DVWGLTGRED LGGANFAVFR LESQFQTSDG ALTVPGSAFS SQAYVGLGGD WGTVTLGRQF DFVGDLLPAF AIGANTPAGL LAWGLPTNAS AGGALDNRVW GVQVNNAVKY VSPTFGGVAF GGMWGFGNVP GTVARSSVQS AMLSYTQGAF SAALAYFGQH DVTAGGNLRN FSGGAGYNVG PFRVFGMVSD VRISAAAPLR ATTYDAGLTY AVTPSLQLGG GFQYQQRGGD IGSANQVTLS ADYSLSKRTG LYAVFARGHD SAYGAQVEAA LGGAASGSTQ TAVRLGLRHQ F
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