Gene Bcen_6342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6342 
Symbol 
ID4097000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp961095 
End bp962864 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content68% 
IMG OID638019631 
Productputative voltage-gated ClC-type chloride channel ClcB 
Protein accessionYP_626178 
Protein GI107029083 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.867968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGCG TCGTTTTCCA TCGCCCCCTT TCAGCCGTGC TCTCGTTCCT GCTGAAGCTG 
CGCACTCGCG CCCGAACGCT GTTCCGCCTG TCGGACGCCC ATACGATGCT GATCTGGTCG
GCCATCGTCG GCGTCGGTGG CGCCTTTGCC ACGATGGCGT TCCGCGAAGG CATCGACCTG
ATGCAGCGGC TGATCTCGGG GCACAGCGGC AGCTTCGTGC AGATGGCGAA GAGCCTGCCG
TGGTACCTGC GGTTCTGGAT GCCGGCCGCG GGTGGCTTCC TCGCCGGCTG CGTGCTGCTG
CTCGCGACGC GCGGCGACAA GGACGCCGCC AAGACCGACT ACATGGAGTC GGTCGCGCTC
GGCAACGGCG TCGTGCCGGT ACGGCAGAGC CTGTGGCGCA GCGTGTCGTC GCTGCTGACG
ATCGGCAGCG GCGGCTCGAT CGGCCGCGAA GGCCCGATGG TGCAGCTTGC GGCGCTCGCC
GCGTCGCTCG TCGGCCGCTT CGCGCACTTC GACCCGCCGC GCCTGCGCCT GCTGGTCGCG
TGCGGGGCGG CGGCCGGCAT CACGTCCGCG TACAACGCGC CGATCGCCGG CGCCTTTTTC
GTGTCGGAAA TCGTGCTCGG CACGATCGCG ATGGAGAGCT TCGGGCCGAT GGTCGTCGCG
TCGGTCGTCG CAAACATCGT GATGCGCGAA TTCGCCGGCT ACCGGCCGCC GTACGAGATG
CCCGTGTTTC CCGCCGTGAC CGGCCCCGAG GTGCTGCCGT TCGTCGTGCT CGGCGCGCTG
TGCGGCGTGC TCGCGCCGCA GTTCCTGCAC CTGCTCGACG CATCGAAGAC GCAGTTCAAG
CGGCTGCCGG TGCCGTTGCC CGTGCGGCTC GCGCTCGGCG GCCTCGTCGT CGGCGTGATC
TCGGTGTGGA TTCCGGACGT GTGGGGCAAC GGCTACAGCG TCGTGAACCA CATCCTCCAT
GCGCCGTGGA CCTGGCAGGC GCTCGTCGCG GTCCTCGTGT TCAAGGTGAT CGCGACCGCC
GCGACCGCCG GCTCGGGCGC GATCGGCGGC GTGTTCACGC CGACGCTGTT CGTCGGCGCC
GTGTTCGGCT CGCTGTTCGG GCTCGCGATG GACGCGCTGT GGCCCGGCCA TACGTCCGCG
TATTTCGCGT ACGCGATCGT CGGGATGGGC GCGTTCATGG CGGGCGCCAC GCAGGCGCCG
CTGATGGCGA TCCTGATGAT CTTCGAGATG ACGCTGAGCT ATCAGGTCGT GCTGCCGCTG
CTGGTGTCGT GCGTATTCGC GTATTTCGTC GCGCGCGCGA CGGGCACCAC GTCGATGTAT
GAAATCACGC AGCACCACTA CCAGGACGCG CAGGAGCGGC AGCGGCTGCG CACCACGCAG
ATGCGCGAGC TGATCCAGCC TGCGCAGACG GTCGTGCCGC TCACCGCGAG CGTCGCCGAC
ATGACGCGCG TGTTTCTCGA ATATCCGGTG AAGTATCTGT ACGTGACCGA CGACGCCGGG
CGCTTTCGCG GCGCGGTCGC GTTGAAGGAC ATCACGTCCG ATTTGCTCGA CAAGCGCGAC
ACGACCGACA AGACGGCCGC GCACTACGCG CACACGCCGT TTCCGCTGCT CACGCCCGAC
ATGCCGCTCG CGACCGCGCT CCAGCGCTTC ATGGCGTTCC AGGGCGAACG CCTGCCGGTG
ATCGAGAGCG AAGCCGAGCC GACGCTCGCG GGCGTGGTCT ACAAGACGTC GCTGCTCGAC
GCGTACCGGC GGATGACCGG CGAACGCTGA
 
Protein sequence
MLRVVFHRPL SAVLSFLLKL RTRARTLFRL SDAHTMLIWS AIVGVGGAFA TMAFREGIDL 
MQRLISGHSG SFVQMAKSLP WYLRFWMPAA GGFLAGCVLL LATRGDKDAA KTDYMESVAL
GNGVVPVRQS LWRSVSSLLT IGSGGSIGRE GPMVQLAALA ASLVGRFAHF DPPRLRLLVA
CGAAAGITSA YNAPIAGAFF VSEIVLGTIA MESFGPMVVA SVVANIVMRE FAGYRPPYEM
PVFPAVTGPE VLPFVVLGAL CGVLAPQFLH LLDASKTQFK RLPVPLPVRL ALGGLVVGVI
SVWIPDVWGN GYSVVNHILH APWTWQALVA VLVFKVIATA ATAGSGAIGG VFTPTLFVGA
VFGSLFGLAM DALWPGHTSA YFAYAIVGMG AFMAGATQAP LMAILMIFEM TLSYQVVLPL
LVSCVFAYFV ARATGTTSMY EITQHHYQDA QERQRLRTTQ MRELIQPAQT VVPLTASVAD
MTRVFLEYPV KYLYVTDDAG RFRGAVALKD ITSDLLDKRD TTDKTAAHYA HTPFPLLTPD
MPLATALQRF MAFQGERLPV IESEAEPTLA GVVYKTSLLD AYRRMTGER