Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6297 |
Symbol | rimO |
ID | 4096728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 910369 |
End bp | 911730 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638019586 |
Product | ribosomal protein S12 methylthiotransferase |
Protein accession | YP_626133 |
Protein GI | 107029038 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCCAAT CCCCCAAAGT AGGGTTCGTA TCCCTCGGCT GCCCTAAAGC GCTCGTCGAT TCCGAACAGA TCATCACGCA ACTGCGCGCC GAAGGTTATG AAATCTCCGG CAGCTACGAC GGCGCCGACC TCGTCGTCGT GAACACCTGC GGCTTCATCG ACGAAGCCGT GCAGGAAAGC CTCGACGCGA TCGGCGAAGC GCTGACCGAG AACGGCAAGG TCATCGTCAC CGGCTGCCTC GGCGCGAAGT CGAGCGCGAG CGGCTCGAAC CTGATCGAGG AAGTCCACCC GAAGGTGCTC GCGGTCACCG GCCCGCACGC GGTGGGCGAA GTGATGCAGG CCGTGCATTC GCACCTGCCG AAGCCGCACG ATCCGTTCGT CGACCTCGTG CCCGCGGCCG GCATCAAGCT CACGCCGCGT CACTACGCAT ACCTGAAGAT CTCCGAAGGC TGCAATCACC GCTGCACGTT CTGCATCATC CCGTCGATGC GCGGCGATCT GGTGTCGCGT CCGGTCGCCG AAGTGATGCT GGAAGCCGAG AACCTGTTCA AGTCGGGCGT GAAGGAACTG CTCGTGATCT CGCAGGACAC GAGCGCATAC GGTGTCGACG TGAAGTACCG CACGGGCTTC TGGAATGGCA AGCCGATCAA GACGCGCATG ACCGACCTGG TCGCCGCGCT CGGCGAACTC GCCGCGCAGT ACGGTGCGTG GGTGCGCCTG CACTACGTAT ATCCGTATCC GAGCGTCGAC GAAGTGATTC CGCTGATGGC CGAAGGTGCG TTCAAGGGCC ACGTGCTGCC GTATCTCGAC GTGCCGTTCC AGCATGCTCA TCCGGAAGTG CTGAAGCGCA TGAAGCGTCC GGCGAACGCC GAGAAGGTGC TCGAGCGTGT GCAGAAGTGG CGCGAGATCT GCCCGGACCT GACGATCCGC AGCACGTTCA TCGCGGGCTT CCCCGGCGAG ACGGAAGAAC AGTTCGAAAC GCTGCTCGAC TTCATCCGCG AAGCGGAACT CGATCGCGTC GGCTGTTTCG CGTATTCGCC GGTCGAAGGC GCGACCGCGA ACGACCTGGA CGGCGCGCTG CCGGACGAGG TTCGCGAGGA GCGTCGCGCG CGCTTCATGG AAGTGGCCGA GGAAGTGTCG GCGAACCGCA TGCAGCGCAA GGTCGGCAAG ACGCTCAAGG TGCTGATCGA CGAAGTCAGC GCGGAAGGCG GCATCGGCCG TACGGCCGCC GATGCGCCGG AGATCGACGG CGTCGTCTAC GTCGAGCCGG CGGCGAAGGC ATCGAAGCGC TACAAGGTCG GCGATTTCGT CTCCGTGAAG ATCACGGGCG CCGACGGCCA CGATCTGTGG GGCGAGGTGT AA
|
Protein sequence | MSQSPKVGFV SLGCPKALVD SEQIITQLRA EGYEISGSYD GADLVVVNTC GFIDEAVQES LDAIGEALTE NGKVIVTGCL GAKSSASGSN LIEEVHPKVL AVTGPHAVGE VMQAVHSHLP KPHDPFVDLV PAAGIKLTPR HYAYLKISEG CNHRCTFCII PSMRGDLVSR PVAEVMLEAE NLFKSGVKEL LVISQDTSAY GVDVKYRTGF WNGKPIKTRM TDLVAALGEL AAQYGAWVRL HYVYPYPSVD EVIPLMAEGA FKGHVLPYLD VPFQHAHPEV LKRMKRPANA EKVLERVQKW REICPDLTIR STFIAGFPGE TEEQFETLLD FIREAELDRV GCFAYSPVEG ATANDLDGAL PDEVREERRA RFMEVAEEVS ANRMQRKVGK TLKVLIDEVS AEGGIGRTAA DAPEIDGVVY VEPAAKASKR YKVGDFVSVK ITGADGHDLW GEV
|
| |