Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6198 |
Symbol | |
ID | 4096898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 804187 |
End bp | 804657 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638019488 |
Product | LysM domain/BON superfamily protein |
Protein accession | YP_626035 |
Protein GI | 107028940 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0206564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCTTC TTTCGTTTAT TAAAGAGGCG GGTGAAAAAC TGCTGGGTCA CGCCGATGCG CAAGCAGCGG AAGATCCGAA TGCCGCGAAC CAGACTGCGG CCGACGCAAT CAAGAATTAC ATCAGCTCGC AAGGTCTCGA TACGTCGAAC CTGACCGTCG CGTTCGACGG CGCATCGCGC ACCGTCACGC TGTCGGGCAG CGTCGCCGAT CTCGACACGA AGGCGAAGGT CAAGGTCGCG GCCGGCAACG TGCAGGGTGT CGCGGGCGTC AACGATGACG ATCTGCAGCC GGACGATCCG GAAGTGCAGT ACCACGACGT GAAGCCGGGC GACACGCTGT CGGCGATCGC CAAGGAAGTG TACGGCGATG CGAACAAGTA TCCGGTGATC TTCGAAGCGA ACAAGCCGAT GCTGTCGAGC CCGGACCGGA TCTACCCGGG CCAGAAGCTC GTGATTCCGC CGCAGTCCTG A
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Protein sequence | MGLLSFIKEA GEKLLGHADA QAAEDPNAAN QTAADAIKNY ISSQGLDTSN LTVAFDGASR TVTLSGSVAD LDTKAKVKVA AGNVQGVAGV NDDDLQPDDP EVQYHDVKPG DTLSAIAKEV YGDANKYPVI FEANKPMLSS PDRIYPGQKL VIPPQS
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