Gene Bcen_6161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6161 
Symbol 
ID4096763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp760762 
End bp761475 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID638019451 
ProductABC transporter related 
Protein accessionYP_625998 
Protein GI107028903 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.455478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAGA TTACCGATCC GATCATCGAA GTCCATGACG TGTGCAAGCG GGTTGCCGAT 
GCAACGGGCG AGCTGACGAT CCTCGACGGC ATCACGCTCG CCGTGCAGCC GGGCAGCAGC
CTCGCGATCG TCGGCGCGTC GGGGTCGGGC AAATCGACGC TGCTTGGCCT GCTTGCAGGG
TTGGACAGCG CGACGAGCGG CACGGTTCGC CTGCTCGGCC GCGCGCTCGA CCAGCTCGAC
GAGGACGAAC GCGCGGCGCT GCGCAACGGC GCGGTCGGCT TCGTGTTCCA GTCGTTCCAG
CTGATGCCGC ATCTGACGGC GCTCGAGAAC GTGATGCTGC CGCTCGAACT GCAGGGCGGC
ATCAGCGCGC GCGATGCGGC CGACCGTGCG CGGGCGCTGC TCGTGCAGGT CGGTCTCGGC
GAACGCACCG CGCATTATCC GAAGCTGCTG TCGGGCGGCG AACAGCAGCG TGTCGCGCTC
GCCCGCGCGT TCGTCACGCG CCCGGCGATC CTGTTCGCCG ACGAGCCGAC CGGCAGTCTC
GACGCGGCAA CCGGCCACGC GGTCATCGAC CTGATGTTCG AGCTGAACCG CACGCACGGC
GCGACGCTCG TGCTCGTCAC GCACGACGCG GAACTCGCGC GCCGCTGCGC AACGACGGTC
ACCATCGACG CGGGGCGCAT CGTCGCGCCG CACGCGGCAT CGCGCAACGC GTGA
 
Protein sequence
MFKITDPIIE VHDVCKRVAD ATGELTILDG ITLAVQPGSS LAIVGASGSG KSTLLGLLAG 
LDSATSGTVR LLGRALDQLD EDERAALRNG AVGFVFQSFQ LMPHLTALEN VMLPLELQGG
ISARDAADRA RALLVQVGLG ERTAHYPKLL SGGEQQRVAL ARAFVTRPAI LFADEPTGSL
DAATGHAVID LMFELNRTHG ATLVLVTHDA ELARRCATTV TIDAGRIVAP HAASRNA