Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6136 |
Symbol | ispD |
ID | 4096870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 732588 |
End bp | 733298 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638019423 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_625973 |
Protein GI | 107028878 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.626218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTCCCC GACTTTTTGC CCTGATTCCC TGCGCCGGCA CGGGCAGCCG TTCCGGTTCG GCCGTGCCGA AGCAATACCG CACGCTGGCC GGCCGCGCGC TGCTGCACTA CACGCTTGCC GCGTTCGACG CGTGCAGCGA GTTCGCGCAG ACGCTGGTCG TGCTCGCGCC CGACGACTCC CATTTCGATG CACGCCGCTT CGCGGGCCTG CGCTTCGCGG TGCGCCGCTG CGGCGGCGGC TCGCGGCAGG CGTCGGTGCT CAAAGGGCTG CTGGAACTGG CCGAATTCGG CGCGACCGAC CACGACTGGG TGCTGGTGCA CGACGCCGCG CGCCCGGGCA TCACGCCCGA GCTGATCCGC ACGCTCGTCG CGACGCTTAA GGACGACCCG GTCGGCGGGA TCGTCGCGCT GCCGGTGGCC GACACGCTCA AGCGGGTGCC GGCCGGCGGT GACGCGATCG CGCGCACGGA GTCGCGCGAC GCCCTGTGGC AGGCGCAGAC CCCCCAGATG TTCCGCATCG GCATGCTGCG CGAAGCGATC CTGCAGGCGC AGCGCGAAGG GCACGACCTG ACCGACGAAG CGAGCGCGAT CGAATGGGCC GGCCACACGC CGCGCGTCGT GCAGGGCAGC CTGCGCAACT TCAAGGTCAC GTACCCGGAA GATTTCGCGC TCGCGGAGGC GATCCTCGCG CGCCCCGCGA ACGCTTCCTG A
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Protein sequence | MTPRLFALIP CAGTGSRSGS AVPKQYRTLA GRALLHYTLA AFDACSEFAQ TLVVLAPDDS HFDARRFAGL RFAVRRCGGG SRQASVLKGL LELAEFGATD HDWVLVHDAA RPGITPELIR TLVATLKDDP VGGIVALPVA DTLKRVPAGG DAIARTESRD ALWQAQTPQM FRIGMLREAI LQAQREGHDL TDEASAIEWA GHTPRVVQGS LRNFKVTYPE DFALAEAILA RPANAS
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