Gene Bcen_6078 details

Gene Information

• Locus tag: Bcen_6078
• Symbol: smpB
• ID: 4097292
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008062
• Strand: -
• Start bp: 676525
• End bp: 676971
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 638019366
• Product: SsrA-binding protein
• Protein accession: YP_625916
• Protein GI: 107028821
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATCA TCGACAACAG GAAAGCGCAC TTCGATTATC ACATCGAGGA ACGCTACGAG 
GCGGGGCTCG TGCTGGAGGG CTGGGAAGTC AAGGCGCTGC GCGCCGGACG CGGCCAGATC 
AAGGAAGGCT ACGTCGTGGT GAAGAACGCC GAGATCTTCC TGATCGGGAC CCATATCAGC 
CCGCTGCCCG AAGCCTCGAC GCACATCAAG CCCGACCCGG TTCGCACGCG CAAGCTGCTG 
CTGCACCGCG AGGAAATCAA GAAGCTGATC GGCAAGGTCG AGCAGCGCGG CTACACGCTC 
GTGCCGCTTA ACTTCCACTA CAAGGGCGGT CGCGTGAAAT GCGACATCGC GCTCGCGAAG 
GGCAAGAAGC TGCACGACAA GCGCGAAACC GAGAAGAAGC GCGACTGGGA ACGCGAGAAG 
GCACGCATCA TGCGCGCCGG CACCTGA 

 

Protein sequence

MSIIDNRKAH FDYHIEERYE AGLVLEGWEV KALRAGRGQI KEGYVVVKNA EIFLIGTHIS 
PLPEASTHIK PDPVRTRKLL LHREEIKKLI GKVEQRGYTL VPLNFHYKGG RVKCDIALAK 
GKKLHDKRET EKKRDWEREK ARIMRAGT