Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6048 |
Symbol | |
ID | 4097099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 638125 |
End bp | 639357 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638019336 |
Product | succinyldiaminopimelate transaminase |
Protein accession | YP_625886 |
Protein GI | 107028791 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCTT CGCCCGTGAA CCCTCGACTC GACTCGCTCC AGCCCTATCC CTTCGAAAAG CTGCGCGCCC TGTTCAAGGA CGTGACGCCT TCCGGCGACC TCAAACCGAT CAGCTTCGGC ATCGGCGAGC CCAAACACGC GACGCCGGCG CTGATCCGCG ACGCCGTGGT GGCCGCGCTC GACGGGCTCG CGTCGTACCC GGCCACGGCC GGCTCGGACG CGCTGCGCAC GTCGATCGCG CACTGGCTCG AGCGCCGCTA CGGGCTGCCG GCAATCGATC CGGCCACGCA GGTGCTGCCG GTGTCGGGCT CGCGCGAAGC GCTGTTCTCG CTCGCGCAGA CGGTGATCGA TGCACGGCCG TCCGCGGACG GCAAGAAGGC GATCGTACTC TGTCCGAATC CTTTCTATCA AATTTACGAA GGCGCGGCGC TGCTCGCCGG TGCCGAACCC TATTTCGCGA ACAGCGACCC GGCCCGCAAC TTCGCGTGCG ACTACGCGGC CGTGCCCGAC GACGTGTGGG CGCGCACGCA GCTGCTGTAC GTGTGCTCGC CCGGCAACCC GACGGGCGCC GTGCTGACGC TCGACGACTG GCGCGAGCTG TTCGCGCTGT CGGACCGTCA CGGTTTCGTG ATCGCGTCCG ACGAGTGCTA TTCCGAGATC TATTTCGACG AAGCGGCGCC GCCGCTCGGC GGCCTCGAGG CCGCGCACCG CCTCGGCCGC GGCTTCGAGC GGCTCGTGAT GCTGTCGAGC CTGTCGAAGC GCTCGAACGT GCCGGGCATG CGCTCGGGCT TCGTCGCCGG CGACGCCGCG CTGCTCAAGA AATTCCTGCT GTACCGCACG TACCACGGCG CCGCGCTGTC GCCGGTCTGG CAGCACGCGA GCATCGCCGC ATGGAACGAC GAGGCGCACG TGCGCGAGAA CCGCGCGCTG TACCTGCAGA AGTTCAACAC GGTCACGCCG ATGCTCGCCG ACGTGATCGA CGTGAAGCTG CCCGACGCCG CGTTCTACCT GTGGGCCAAC GTGTCGCGCA CCGGCCTGTC GGACACCGAG TTCGCCCGCC GCCTGTACGC CGACTATAAT GTGACGGTTC TGCCCGGCTC GTACCTGGCG CGCGATGCGC ACGGCACGAA CCCGGGCCGC GATTTCATCC GGATCGCGCT CGTCGCGGGC ACCCCCGAAT GCGTCGAGGG CGCGCAACGC ATCGTCGATT TCTGCCGCGC TCTCGCGCGG TAA
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Protein sequence | MAASPVNPRL DSLQPYPFEK LRALFKDVTP SGDLKPISFG IGEPKHATPA LIRDAVVAAL DGLASYPATA GSDALRTSIA HWLERRYGLP AIDPATQVLP VSGSREALFS LAQTVIDARP SADGKKAIVL CPNPFYQIYE GAALLAGAEP YFANSDPARN FACDYAAVPD DVWARTQLLY VCSPGNPTGA VLTLDDWREL FALSDRHGFV IASDECYSEI YFDEAAPPLG GLEAAHRLGR GFERLVMLSS LSKRSNVPGM RSGFVAGDAA LLKKFLLYRT YHGAALSPVW QHASIAAWND EAHVRENRAL YLQKFNTVTP MLADVIDVKL PDAAFYLWAN VSRTGLSDTE FARRLYADYN VTVLPGSYLA RDAHGTNPGR DFIRIALVAG TPECVEGAQR IVDFCRALAR
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