Gene Bcen_6029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6029 
Symbol 
ID4097080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp617793 
End bp619100 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content65% 
IMG OID638019317 
Productisocitrate lyase 
Protein accessionYP_625867 
Protein GI107028772 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCGTC AGCAACAGGC ACAGGAACTG CAGCAGCAAT GGGAAACCGA TCCGCGCTGG 
AAGGGCATCA AGCGCAGCTA CTTGGCTGAG GACGTGGTCC GCCTGCGCGG CTCGATCCCG
ATCGAGCACA CGCTGGCCAA GCGCGGCGCG GAAAAACTGT GGGGCCTCAT CAACAACGAG
CCGTTCGTCA ACGCACTCGG CGCGCTGACC GGCAATCAGG CGATGCAGCA GGTGAAGGCC
GGCCTGAAGG CCATCTACCT GTCCGGCTGG CAAGTCGCCG GCGACGCGAA CGTCGCGGGC
GAAATGTACC CGGACCAGTC GCTGTACCCG GCCAACTCGG TGCCGCTCGT CGTGAAGCGC
ATCAACAACA CGCTGACGCG CGCCGACCAG ATCCAGTGGT CGGAAGGCAA GAACCCGGGC
GACGAAGGTT ACGTCGACTT CTTCGCGCCG ATCGTCGCCG ATGCGGAAGC CGGTTTCGGC
GGCGTGCTCA ATGCGTTCGA GCTGATGAAG GCGATGATCG AGGCCGGCGC ATCGGGCGTT
CACTTCGAGG ACCAGCTCGC ATCGGTGAAG AAGTGCGGCC ACATGGGCGG CAAGGTGCTC
GTGCCGACGC GCGAAGCCGT CGCGAAACTG TCGGCCGCGC GGCTCGCGGC CGACGTGATG
GGCACGCCGA CCGTGCTGGT TGCGCGCACC GACGCGGAAG CGGCCGACCT GATCACGTCC
GACGTCGACG ACAACGACAA GCCGTTCCTG ACCGGCGAGC GCACGGTGGA AGGCTTCTTC
CGCACGAAGC CGGGCCTCGA ACAGGCGGTC TCGCGCGGCC TCGCGTACGC GCCGTACGCC
GACCTGATCT GGTGCGAAAC CGGCAAGCCC GATCTCGAGT ACGCGAAGAA GTTCGCGGAA
GCGATCCACA AGCAGTTCCC GGGCAAGCTG CTGTCGTACA ACTGCTCGCC GTCGTTCAAC
TGGAAGAAGA ACCTCGACGA CGCGACGATC GCGAAGTTCC AGAAGGAGCT GGGCGCGATG
GGCTACAAGT TCCAGTTCAT CACGCTGGCC GGCTTCCATG CGCTGAATTA CTCGATGTTC
AACCTCGCGC ACGGCTATGC CCGCACGCAG ATGAGCGCGT TCGTCGAACT GCAGCAGGCC
GAGTTCGCGG CCGCCGACAA GGGCTTCACG GCAGTCAAGC ATCAGCGCGA GGTCGGCACC
GGCTACTTCG ACGCGGTGAC GCAGACAGTC GAACGCGAAG CATCGACGAC CGCGCTGCAC
GGCTCGACCG AGGACGAACA GTTCTTCGAC GGCAAGAAAG TCGCGTAA
 
Protein sequence
MSRQQQAQEL QQQWETDPRW KGIKRSYLAE DVVRLRGSIP IEHTLAKRGA EKLWGLINNE 
PFVNALGALT GNQAMQQVKA GLKAIYLSGW QVAGDANVAG EMYPDQSLYP ANSVPLVVKR
INNTLTRADQ IQWSEGKNPG DEGYVDFFAP IVADAEAGFG GVLNAFELMK AMIEAGASGV
HFEDQLASVK KCGHMGGKVL VPTREAVAKL SAARLAADVM GTPTVLVART DAEAADLITS
DVDDNDKPFL TGERTVEGFF RTKPGLEQAV SRGLAYAPYA DLIWCETGKP DLEYAKKFAE
AIHKQFPGKL LSYNCSPSFN WKKNLDDATI AKFQKELGAM GYKFQFITLA GFHALNYSMF
NLAHGYARTQ MSAFVELQQA EFAAADKGFT AVKHQREVGT GYFDAVTQTV EREASTTALH
GSTEDEQFFD GKKVA