| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5951 |
|---|
| Symbol | |
|---|
| ID | 4097201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | + |
|---|
| Start bp | 532186 |
|---|
| End bp | 533409 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638019231 |
|---|
| Product | cysteine desulfurase |
|---|
| Protein accession | YP_625789 |
|---|
| Protein GI | 107028694 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.350283 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAG AGACTCTCCA CCTGCCCATC TATATGGATT ACAGCGCGAC GACGCCCGTC
GATCCGCGCG TAGTCGACAA GATGGTGCCG TACCTGCGCG AGCAGTTCGG CAACCCGGCG
TCGCGCAGCC ACGCTTACGG CTGGGACGCG GAGCGTGCAG TCGAGGAAGC GCGCGAGCAG
GTGGCGGCGC TGGTGAACGC CGACCCGCGC GAGATCATCT GGACGTCCGG CGCCACGGAG
TCGGACAACC TTGCGATCAA GGGCGCCGCG AACTTCTACA AGGGCAAGGG CAAGCACATC
ATCACGGTGA AGACCGAGCA CAAGGCCGTG CTCGATACGT GCCGCGAGCT CGAGCGCGAC
GGTTTCGAAG TCACCTATCT CGACGTGAAG GATGACGGCC TGATCGACCT CGACGTGTTC
AAGGCCGCGC TGCGCCCGGA CACGATCCTC GTGTCGGTGA TGCACGTGAA CAACGAGATC
GGCGTGATCC AGGACATCGA GACGATCGGC GAAATCTGCC GCGAGAAGGG CATCGTGTTC
CACGTCGATG CCGCGCAGTC GACCGGCAAG GTCGCGATCG ACCTCGCGAA GCTGAAGGTC
GACCTGATGT CGTTCTCGGC ACACAAGACC TACGGCCCGA AGGGCATCGG CGCGCTGTAC
GTGCGCCGCA AGCCGCGCGT GCGCATCGAA GCGCAGATGC ACGGCGGCGG TCACGAGCGC
GGCATGCGTT CGGGCACGCT GCCGACGCAC CAGATCGTCG GCATGGGTGA AGCGTTCCGC
ATCGCGCGCG AGGAAATGGC GACCGAGAAC GAGCGTATCC GCATGCTGCG CGACAAGCTG
CTGCGCGGCC TGTCGCAGAT CGAGGAAACC TACGTGAACG GCGACATGGA TCACCGTGTC
CCGCACAACC TGAACATCAG CTTCAACTTC GTCGAAGGCG AGTCGCTGAT CATGGCGATC
AAGGACGTCG CGGTGTCGTC GGGCTCCGCG TGCACGTCGG CATCGCTGGA GCCGTCGTAC
GTGCTGCGTG CGCTCGGCCG CAACGACGAG CTCGCGCACA GCTCGATCCG CTTCACGGTC
GGCCGCTTCA CGACGGAGCA GGAGGTCGAC TTCGTGATCA ACCTGCTGAA CAGCAAGATC
GCGAAGCTGC GCGAACTGTC GCCGCTCTGG GAAATGCACC AGGAAGGCAT CGATCTGTCG
ACGATCGAAT GGGCCGCGCA CTGA
|
|---|
| Protein sequence | MTQETLHLPI YMDYSATTPV DPRVVDKMVP YLREQFGNPA SRSHAYGWDA ERAVEEAREQ
VAALVNADPR EIIWTSGATE SDNLAIKGAA NFYKGKGKHI ITVKTEHKAV LDTCRELERD
GFEVTYLDVK DDGLIDLDVF KAALRPDTIL VSVMHVNNEI GVIQDIETIG EICREKGIVF
HVDAAQSTGK VAIDLAKLKV DLMSFSAHKT YGPKGIGALY VRRKPRVRIE AQMHGGGHER
GMRSGTLPTH QIVGMGEAFR IAREEMATEN ERIRMLRDKL LRGLSQIEET YVNGDMDHRV
PHNLNISFNF VEGESLIMAI KDVAVSSGSA CTSASLEPSY VLRALGRNDE LAHSSIRFTV
GRFTTEQEVD FVINLLNSKI AKLRELSPLW EMHQEGIDLS TIEWAAH
|
|---|
| |