Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5936 |
Symbol | |
ID | 4096713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 511287 |
End bp | 513374 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638019216 |
Product | oligopeptidase A |
Protein accession | YP_625774 |
Protein GI | 107028679 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00788443 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCCA GCGCCAACAC CAATCCGCTC CTCGACTTCT CCGGCCTGCC CCGTTTCGGC GAGATCCGCC CGGAACACGT GACGCCCGCG CTCGATACGC TGCTCGACGC CGCCAGCCGC GCGGTCGAAG CGGCGAGCGC GAGCGACACG CCGTCGACCT GGGCCGCCGT CGTCGAGACG GTCGAGCAGG CCACGGAGCC GCTCGGCCGC GCATGGGGCA TCGTCGGCCA TCTGAATGCG GTCGCCGACA CGCCCGAACT GCGCGCCGCC TACGGTGAAA ACCTGCCGCG CGTGACCGAG TTCTGGTCGA GCGTCGGCCA GAATCTCGCG CTGTACGAAA AGTACAAGGC GATCGCCGCG AGCGCCGAAT ACGCGACGTT GTCCGCCGAG CGCAAGAAGA TCCTCGACAA TGCGCTGCGC GACTTCCGCC TGTCGGGCGC CGAGCTGCCC GAGGACCAGA AGCCGCGCTT CGCGGAACTG CAGGAACAGC AGGCCGCGCT GTCGAAGGCA TTCTCCGATC ACGTGCTCGA TGCAACCAAC GCGTACGCGT ACTTCGTCAC CGACGAAGCC GAGCTGGCTG GCCTGCCCGG CGACGCGATC GAGGCTGCTC GCGAAGCCGC TCAGAAGGAC GGCAAGGAAG GCTGGAAATT CACGCTGCAT TTCCCGTCGT ACTTCCCGGT GCTGCAGTAC GCGGACAACC GCGCGCTGCG CGAGACGCTC TACCGCGCCT ATGCGACGCG CGCGTCGGAG CTCGGGCCGC AGTACGGCGA CGGCAAGACC GAATGGGACA ACACGGCGAT CGTCGTCGAC GCGCTGAAGC TGCGCCGCGA AGAAGCGCAG ATGCTCGGCT ACCGCAACTT CGCCGAAGTG TCGCTCGCGC CGAAGATGGC CGAATCGCCG CAGCAGGTGA TCGCATTCCT CGAGGATCTC GCGACGCGCG CGCGCCCGCA CGCGGACAAG GACTGGGACG AGCTGCGCAC GTTCGCCGCG AAGGAGCTCG GCCTCGCCGA ACTCGCGCCG TGGGACGTCG CATACGCGGC CGAAAAGCTG CGCCAGCAGC GCTATGCGTT CTCGGAAAAC GAGGTCAAGC AGTACTTCCC GGAACCGGCC GCGCTGAAGG GCCTGTTCAC CGTCACCGAA ACGCTGTTCG GCGTGAAGAT CAAGCCGGAC GACGCGCCGG TATGGCACAA GGACGTGCGC TTCTTCCGCG TCGAGAACCG CGACGGCTCG CTCGTCGCGC AGTTCTATCT CGACCTGTAC GCACGCGAAG GCAAGCGCGG CGGCGCCTGG ATGGACGACG CGCGTTCGCG CGCGAAGCGC GGCAGCGACG TGCAGACGCC CGTCGCGTAC CTGACCTGCA ACTTCTCCGC GCCGGTCGGC GGCAAGCCCG CGTGCTTCAC GCACGACGAA GTGATCACGC TGTTCCATGA ATTCGGCCAC GGGCTGCATC ACATGCTCAC GCGCGTCGAC GAGCTCGGCG TGTCGGGCAT CAACGGTGTC GAATGGGATG CGGTCGAACT GCCGTCGCAG TTCATGGAAA ACTTCTGCTG GGAATGGGAC GTGCTGTCGT CGATGTCGTC GCACGTCGAT ACGGGCGCGT CGCTGCCGCG CGAGCTGTTC GACAAGATGA TCGCCGCGAA GAACTTCCAG AGCGGGCTCG GCACGCTGCG CCAGATCGTG TTCTCGATGT TCGACATGCT GCTGCACGTC GACTTCGACC CGGCCGGCGC CACCGGCGTG ACCGCGTTCG CGCGCGAGAT CAACGAGCGC TATCACGTGA TCCCGCAGGC GGCGTTCTCG CGCTGGCCGA ACACGTTCAG CCACATCTTC GCGGGCGGCT ATGCGGCCGG CTACTACAGC TACAAGTGGG CCGAAGTGCT GTCGGCCGAT GCGTACGCGG CGTTCGAGGA AGCGGCCGCC GCCAGCGGCA GCGTGCTCGA CGCGGCAACC GGCACGCGCT ATCGCCGCGA AATCCTCGAG GTCGGCGGTA GCCGCCCGGC GATGGAGTCG TTCAAGGCGT TCCGCGGCCG CGAGCCGCAG ATCGACGCGC TGCTGCGCCA CAACGGGATG GCCGCGTCCG CGCACTGA
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Protein sequence | MSASANTNPL LDFSGLPRFG EIRPEHVTPA LDTLLDAASR AVEAASASDT PSTWAAVVET VEQATEPLGR AWGIVGHLNA VADTPELRAA YGENLPRVTE FWSSVGQNLA LYEKYKAIAA SAEYATLSAE RKKILDNALR DFRLSGAELP EDQKPRFAEL QEQQAALSKA FSDHVLDATN AYAYFVTDEA ELAGLPGDAI EAAREAAQKD GKEGWKFTLH FPSYFPVLQY ADNRALRETL YRAYATRASE LGPQYGDGKT EWDNTAIVVD ALKLRREEAQ MLGYRNFAEV SLAPKMAESP QQVIAFLEDL ATRARPHADK DWDELRTFAA KELGLAELAP WDVAYAAEKL RQQRYAFSEN EVKQYFPEPA ALKGLFTVTE TLFGVKIKPD DAPVWHKDVR FFRVENRDGS LVAQFYLDLY AREGKRGGAW MDDARSRAKR GSDVQTPVAY LTCNFSAPVG GKPACFTHDE VITLFHEFGH GLHHMLTRVD ELGVSGINGV EWDAVELPSQ FMENFCWEWD VLSSMSSHVD TGASLPRELF DKMIAAKNFQ SGLGTLRQIV FSMFDMLLHV DFDPAGATGV TAFAREINER YHVIPQAAFS RWPNTFSHIF AGGYAAGYYS YKWAEVLSAD AYAAFEEAAA ASGSVLDAAT GTRYRREILE VGGSRPAMES FKAFRGREPQ IDALLRHNGM AASAH
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