Gene Bcen_5936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5936 
Symbol 
ID4096713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp511287 
End bp513374 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content67% 
IMG OID638019216 
Productoligopeptidase A 
Protein accessionYP_625774 
Protein GI107028679 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0339] Zn-dependent oligopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00788443 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCCA GCGCCAACAC CAATCCGCTC CTCGACTTCT CCGGCCTGCC CCGTTTCGGC 
GAGATCCGCC CGGAACACGT GACGCCCGCG CTCGATACGC TGCTCGACGC CGCCAGCCGC
GCGGTCGAAG CGGCGAGCGC GAGCGACACG CCGTCGACCT GGGCCGCCGT CGTCGAGACG
GTCGAGCAGG CCACGGAGCC GCTCGGCCGC GCATGGGGCA TCGTCGGCCA TCTGAATGCG
GTCGCCGACA CGCCCGAACT GCGCGCCGCC TACGGTGAAA ACCTGCCGCG CGTGACCGAG
TTCTGGTCGA GCGTCGGCCA GAATCTCGCG CTGTACGAAA AGTACAAGGC GATCGCCGCG
AGCGCCGAAT ACGCGACGTT GTCCGCCGAG CGCAAGAAGA TCCTCGACAA TGCGCTGCGC
GACTTCCGCC TGTCGGGCGC CGAGCTGCCC GAGGACCAGA AGCCGCGCTT CGCGGAACTG
CAGGAACAGC AGGCCGCGCT GTCGAAGGCA TTCTCCGATC ACGTGCTCGA TGCAACCAAC
GCGTACGCGT ACTTCGTCAC CGACGAAGCC GAGCTGGCTG GCCTGCCCGG CGACGCGATC
GAGGCTGCTC GCGAAGCCGC TCAGAAGGAC GGCAAGGAAG GCTGGAAATT CACGCTGCAT
TTCCCGTCGT ACTTCCCGGT GCTGCAGTAC GCGGACAACC GCGCGCTGCG CGAGACGCTC
TACCGCGCCT ATGCGACGCG CGCGTCGGAG CTCGGGCCGC AGTACGGCGA CGGCAAGACC
GAATGGGACA ACACGGCGAT CGTCGTCGAC GCGCTGAAGC TGCGCCGCGA AGAAGCGCAG
ATGCTCGGCT ACCGCAACTT CGCCGAAGTG TCGCTCGCGC CGAAGATGGC CGAATCGCCG
CAGCAGGTGA TCGCATTCCT CGAGGATCTC GCGACGCGCG CGCGCCCGCA CGCGGACAAG
GACTGGGACG AGCTGCGCAC GTTCGCCGCG AAGGAGCTCG GCCTCGCCGA ACTCGCGCCG
TGGGACGTCG CATACGCGGC CGAAAAGCTG CGCCAGCAGC GCTATGCGTT CTCGGAAAAC
GAGGTCAAGC AGTACTTCCC GGAACCGGCC GCGCTGAAGG GCCTGTTCAC CGTCACCGAA
ACGCTGTTCG GCGTGAAGAT CAAGCCGGAC GACGCGCCGG TATGGCACAA GGACGTGCGC
TTCTTCCGCG TCGAGAACCG CGACGGCTCG CTCGTCGCGC AGTTCTATCT CGACCTGTAC
GCACGCGAAG GCAAGCGCGG CGGCGCCTGG ATGGACGACG CGCGTTCGCG CGCGAAGCGC
GGCAGCGACG TGCAGACGCC CGTCGCGTAC CTGACCTGCA ACTTCTCCGC GCCGGTCGGC
GGCAAGCCCG CGTGCTTCAC GCACGACGAA GTGATCACGC TGTTCCATGA ATTCGGCCAC
GGGCTGCATC ACATGCTCAC GCGCGTCGAC GAGCTCGGCG TGTCGGGCAT CAACGGTGTC
GAATGGGATG CGGTCGAACT GCCGTCGCAG TTCATGGAAA ACTTCTGCTG GGAATGGGAC
GTGCTGTCGT CGATGTCGTC GCACGTCGAT ACGGGCGCGT CGCTGCCGCG CGAGCTGTTC
GACAAGATGA TCGCCGCGAA GAACTTCCAG AGCGGGCTCG GCACGCTGCG CCAGATCGTG
TTCTCGATGT TCGACATGCT GCTGCACGTC GACTTCGACC CGGCCGGCGC CACCGGCGTG
ACCGCGTTCG CGCGCGAGAT CAACGAGCGC TATCACGTGA TCCCGCAGGC GGCGTTCTCG
CGCTGGCCGA ACACGTTCAG CCACATCTTC GCGGGCGGCT ATGCGGCCGG CTACTACAGC
TACAAGTGGG CCGAAGTGCT GTCGGCCGAT GCGTACGCGG CGTTCGAGGA AGCGGCCGCC
GCCAGCGGCA GCGTGCTCGA CGCGGCAACC GGCACGCGCT ATCGCCGCGA AATCCTCGAG
GTCGGCGGTA GCCGCCCGGC GATGGAGTCG TTCAAGGCGT TCCGCGGCCG CGAGCCGCAG
ATCGACGCGC TGCTGCGCCA CAACGGGATG GCCGCGTCCG CGCACTGA
 
Protein sequence
MSASANTNPL LDFSGLPRFG EIRPEHVTPA LDTLLDAASR AVEAASASDT PSTWAAVVET 
VEQATEPLGR AWGIVGHLNA VADTPELRAA YGENLPRVTE FWSSVGQNLA LYEKYKAIAA
SAEYATLSAE RKKILDNALR DFRLSGAELP EDQKPRFAEL QEQQAALSKA FSDHVLDATN
AYAYFVTDEA ELAGLPGDAI EAAREAAQKD GKEGWKFTLH FPSYFPVLQY ADNRALRETL
YRAYATRASE LGPQYGDGKT EWDNTAIVVD ALKLRREEAQ MLGYRNFAEV SLAPKMAESP
QQVIAFLEDL ATRARPHADK DWDELRTFAA KELGLAELAP WDVAYAAEKL RQQRYAFSEN
EVKQYFPEPA ALKGLFTVTE TLFGVKIKPD DAPVWHKDVR FFRVENRDGS LVAQFYLDLY
AREGKRGGAW MDDARSRAKR GSDVQTPVAY LTCNFSAPVG GKPACFTHDE VITLFHEFGH
GLHHMLTRVD ELGVSGINGV EWDAVELPSQ FMENFCWEWD VLSSMSSHVD TGASLPRELF
DKMIAAKNFQ SGLGTLRQIV FSMFDMLLHV DFDPAGATGV TAFAREINER YHVIPQAAFS
RWPNTFSHIF AGGYAAGYYS YKWAEVLSAD AYAAFEEAAA ASGSVLDAAT GTRYRREILE
VGGSRPAMES FKAFRGREPQ IDALLRHNGM AASAH