Gene Bcen_5935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5935 
Symbol 
ID4096712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp510068 
End bp511219 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content69% 
IMG OID638019215 
ProductDNA polymerase IV 
Protein accessionYP_625773 
Protein GI162218074 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0630772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCCGA CCACCATCCT GCCTGCCGAT CTACCCACGC CACCGCCCGG CGACGCGCCG 
CCGCGCATGC GCAAGATCAT TCATTGCGAC TGCGACTGCT TCTACGCGTC GGTCGAGATG
CGCGACGACC CGTCGCTGCG CAACCGGCCG CTCGCGGTCG GCGGTCGCCC CGACCAGCGC
GGCGTGATCG CGACCTGTAA CTACGAGGCG CGGCGCTACG GCGTGCATTC GGCGATGTCG
TCCGCGCTGG CGATGCGCAA GTGCCCGGAC CTGCTGATCC TGCCGTCCGC GATGGACAAG
TATCGCGCGG CGTCGCGGCA GATCATGGCG ATCTATCGCG ACTACACGCC GGACGTCGAG
CCGCTGTCGC TCGACGAGGC GTACCTCGAC GTCAGCGGGT CCGAACGTTG CCAGGGCAGT
GCGACGCTGA TTGCGCGCGA GATCCGCGAG CGCGTGCGCG ATACGGTCGG CGTGACCGTG
TCGGCGGGCG TCGCGCCGAA CAAGTTCATC GCGAAGATCG CGTCCGACTG GAACAAGCCC
GACGGGCTGT TCGTCGTGCG GCCGCACGAG ATCGACGCGT TCGTCGCGGC GCTGCCGGTG
CGCAAGCTGC ACGGCGTCGG CAAGGTGACG GCCACGCGGC TCGACCGGCT CGGCATCCAG
ACCTGCGCGC AATTGCGCGA CTGGCCGCTG ATCGACCTGC ACCGCGAGTT CGGCGCGTTC
GGGCGGCGGC TGTACGAACT GTCGCGCGGG ATCGACGAGC GGCCTGTGCA GGCCGACCAG
GAGCGCAAGT CGGTCAGCGT CGAGACGACC TACGTGACCG ACCTGACGAC GCTCGAACAA
TGCGCGGACG AAATCCGTCG CCTCGTCGTG CAACTCGACG CGCGGATCGA TCGCGCGGGC
GCCGCGCGGT CGATCCGCAA GCTGTACGTG AAGATCCGCT TCGCCGATTT CCAGCGCACG
ACGGTCGAGT GCGTGGCCGA CGCGACGAAT GCCGAGACGG CCGTCACGCT GCTCGCGAAG
GGGTTGTTGC GGCGCGCGCA GCCGGTGCGG CTGCTCGGCG TCGGCGTGCG CATCGACGAG
GATACGGCCG AACGCCACGG GCAATTTCTG CTGTTCGACG ACGAAGTGGG CGACGACACG
CCCGCGCCAT GA
 
Protein sequence
MSPTTILPAD LPTPPPGDAP PRMRKIIHCD CDCFYASVEM RDDPSLRNRP LAVGGRPDQR 
GVIATCNYEA RRYGVHSAMS SALAMRKCPD LLILPSAMDK YRAASRQIMA IYRDYTPDVE
PLSLDEAYLD VSGSERCQGS ATLIAREIRE RVRDTVGVTV SAGVAPNKFI AKIASDWNKP
DGLFVVRPHE IDAFVAALPV RKLHGVGKVT ATRLDRLGIQ TCAQLRDWPL IDLHREFGAF
GRRLYELSRG IDERPVQADQ ERKSVSVETT YVTDLTTLEQ CADEIRRLVV QLDARIDRAG
AARSIRKLYV KIRFADFQRT TVECVADATN AETAVTLLAK GLLRRAQPVR LLGVGVRIDE
DTAERHGQFL LFDDEVGDDT PAP