| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5907 |
|---|
| Symbol | |
|---|
| ID | 4097058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | + |
|---|
| Start bp | 473226 |
|---|
| End bp | 474914 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638019185 |
|---|
| Product | urocanate hydratase |
|---|
| Protein accession | YP_625745 |
|---|
| Protein GI | 107028650 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2987] Urocanate hydratase |
|---|
| TIGRFAM ID | [TIGR01228] urocanate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATC CGAAACACAT CGATCCCCGT CTCGATCCGA CGCGCACGAT CCGCGCGCCG
CGAGGCAGCG AAAAGACCTG CAAGACCTGG CTGGCCGAAG CGGCCTACCG GATGATTCAG
AACAACCTCG ACCCGGAAGT CGCCGAGCAT CCGCATGCGC TCGTCGTGTA CGGCGGTATC
GGCCGTGCTG CGCGTAACTG GGAATGCTAT GACCAGATCC TCGCGTCGCT GAAGGATCTC
GAGGAAAACG AAACGCTGCT GATCCAGTCG GGCAAGCCGG TCGGCGTGTT CCGCACGCAC
AAGGATGCGC CGCGCGTGCT GCTCGCGAAC TCGAACCTGG TGCCGCACTG GGCGAACTGG
GATCACTTCC ACGAACTCGA CCGCAAGGGC CTGATGATGT ACGGCCAGAT GACGGCCGGC
AGCTGGATCT ACATCGGCAG CCAGGGCATC GTGCAGGGCA CCTACGAAAC GTTCTTCTCC
GTCGCGAACC AGCACTTCAA CGGCGATCCG TCGGGCCGCT GGATCCTGAC GGGCGGCCTC
GGCGGGATGG GCGGCGCGCA GCCGCTGGCC GCGACGATGG CCGGCTTCTC GATGATCGCG
GTCGAATGCG ACGAGACGCG CATCGACTTC CGCCTGAAGA CGCGCTACGT CGACAAGAAG
GCGACGACGC TCGACGAAGC GCTCGGCATG ATCGACGAAG CGAAGCGCAC CGGCAAGCCG
GTGTCGATCG GCCTGCTCGG CAACGCGGCC GACGTGTTCG CGGAACTCGT CACGCGCGGC
ATTACGCCGG ACTGCGTGAC CGACCAGACG AGCGCGCACG ACCCGATCAA CGGCTACCTG
CCGCAAGGCT GGACCGTCGC GCAATGGCGC GAAGCGCAGA AGGTCGACCC GCAGAGCATC
GTGAAGGTCG CGAAGCAGTC GATGGCCGTC CAGGTGCGCG CGATGCTCGC GCTGCAGGAA
CGCGGCGCGG CGACGCTCGA CTACGGCAAC AACATCCGCC AGATGGCGCT GGAAATGGGC
GTCGAGAACG CCTTCGACTT CCCGGGCTTC GTGCCGGCGT ACATCCGCCC GCTGTTCTGC
GAAGGCAAGG GCCCGTTCCG CTGGGTCGCG CTGTCCGGCG ATCCGGAAGA CATCTACAAG
ACCGACCAGA AGGTGAAGGA GCTGATCCCC GACGATCCGC ACCTGCACAA CTGGCTCGAC
ATGGCGCGTG AGCGTATCGC GTTCCAGGGC CTGCCGGCGC GGATCTGCTG GGTCGGCGTG
AAGGATCGCT ATCGCCTCGG CCAGGCGTTC AACGAGATGG TGAAGAACGG CGAACTGAAG
GCGCCGATCG TGATCGGTCG CGATCACCTC GATACGGGTT CGGTCGCGAG CCCGAACCGC
GAGACGGAAT CGATGAAGGA CGGCTCGGAC GCCGTGAGCG ACTGGCCGCT GCTGAACGCG
CTGCTGAACA CCGCGGGCGG CGCATCGTGG GTGTCGCTGC ACCATGGCGG CGGCGTCGGC
ATGGGCTTCT CGCAGCACTC GGGCGTCGTG ATCGTCGCCG ACGGCACGGC TGACGCGCAC
GAGCGTCTCG GTCGCGTGCT GCTGAACGAT CCGGCCACGG GCGTGATGCG CCATGCGGAT
GCCGGCTACG AACTCGCGCA GCAGACGGCC CGCGAAGCCG GCCTGAAGCT GCCGATGCTC
GGCCGCTGA
|
|---|
| Protein sequence | MNHPKHIDPR LDPTRTIRAP RGSEKTCKTW LAEAAYRMIQ NNLDPEVAEH PHALVVYGGI
GRAARNWECY DQILASLKDL EENETLLIQS GKPVGVFRTH KDAPRVLLAN SNLVPHWANW
DHFHELDRKG LMMYGQMTAG SWIYIGSQGI VQGTYETFFS VANQHFNGDP SGRWILTGGL
GGMGGAQPLA ATMAGFSMIA VECDETRIDF RLKTRYVDKK ATTLDEALGM IDEAKRTGKP
VSIGLLGNAA DVFAELVTRG ITPDCVTDQT SAHDPINGYL PQGWTVAQWR EAQKVDPQSI
VKVAKQSMAV QVRAMLALQE RGAATLDYGN NIRQMALEMG VENAFDFPGF VPAYIRPLFC
EGKGPFRWVA LSGDPEDIYK TDQKVKELIP DDPHLHNWLD MARERIAFQG LPARICWVGV
KDRYRLGQAF NEMVKNGELK APIVIGRDHL DTGSVASPNR ETESMKDGSD AVSDWPLLNA
LLNTAGGASW VSLHHGGGVG MGFSQHSGVV IVADGTADAH ERLGRVLLND PATGVMRHAD
AGYELAQQTA REAGLKLPML GR
|
|---|
| |