Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5888 |
Symbol | |
ID | 4096622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 450026 |
End bp | 452041 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638019165 |
Product | Na+/solute symporter |
Protein accession | YP_625726 |
Protein GI | 107028631 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGACGC ATCGACTGAT ACGCGCATAC GCGCTCTACA CGCTCGGGTT TCTCGGCTTC GTGCTGCTGA TGTGGCGGAT CGAGCGCGCG ACGGGCTCGG GCGTCTGGAT CGGCTACGTG TTCCTGTTCG TGCCGATCGC CGTGTACGCT GTGATCGGCT TGTTGTCGCG CACGTCCGAC CTCGTCGAGT ACTACGTGGC CGGGCGGCGC GTGCCGTCCG CGTTCAACGG GATGGCGACG GCGGCCGACT GGCTGTCGGC CGCGTCGTTC ATCGGCCTGG CCGGCTCGCT CTACGCGACC GGCTACGACG CGCTCGCGTA CGTGATGGGC TGGACGGGCG GGTTCTGCCT CGTCGCGTTC CTGCTTGCGC CGTATGTGCG CAAGCTCGCG CGCTACACGA TTCCCGACTT TCTCGGCACG CGCTTCTCGA GCACGGCCGT GCGCGCGCTT GCAGCCGGCG CGGCGATCCT GTGTTCGTTC GTGTACCTGG TCGCGCAGAT CCAGGGGATC GGCCTGATCG CGACGCGCTT CATCGGCGTC GATTTCGCGA TCGGTATCTT CTGCGGGCTC GCGGGCATTC TGGTGTGCTC GTTTCTCGGC GGGATGCGCG CGGTCACGTG GACGCAGGTC GCGCAGTACA TCATCCTGAT CAGCGCGATC CTGATTCCGG TGTCGCTGAT CGCGATGAAG AACGGCCTCG GCCCCGTGCC GCAGTTCAAT TACGGCAAGC TGATGGAGCG CGTCGCGGCG CGCGAGGCGC AGGTGCGCGA CGCGCACGAC GAGCAGCAGG TGCGCGATGC GTATCGCCGG CAGGCCGCGG CTATCCAGAC GCGGCTCGAC CGGCTGCCGG CGTCCTATGC GGATGCGCGC CGGCATCTCG TCGACCAGCT TGCCGACCTG CGGCGTCACA ACGGGCCGCT GCGCGAGATC AGCCAGCGCG AGCGCGAACT GGCCGATTTC CCGCGCGATC CGGCAGCGGC GCGCGTGGCG TGGACGCAGG CGCGCGACGA CCTGCTCGCG CGTGCCGAGC CGCCCGTGCC GATGCACGAG CCATTTCCAG CCGCGAGCGA AGACGAACGC AAGCCGCGCG AGCGGAATTT CCTTGCGCTG CTGCTGTGCC TGTCGCTCGG CACCGCGAGC CTGCCGCACA TCCTGACGCG CTACAACACG ACCACGTCGG TCGCGTCGGC GCGGCGCTCG GTCGGCTGGA CGCTGTTCTT CATCGCGCTG TTCTATCTGA GCGTGCCGGT GCTCGCGGTG CTGATCAAGT ACGAGATCCT CGCGAATCTG GTCGGGCGGC CGTTCGCCGA ATTGCCGGCG TGGGTCACGC AATGGCATCA CTTCGAACCC GACCTGATCG GCGTCGTCGA GGTGATTCGC GACGGCATCG TGCACTGGTC GGAAATCCAG ATGCAGCCGG ACATGGTCGT GCTGGCCGCG CCGGAGATCG CGGGGCTGCC GTACGTGGTG TCGGGGCTGA TCGCGGCCGG TGCGCTGGCC GCGGCGCTGT CGACGGCGGA CGGGTTGCTG CTGACGATCG CGAATGCGCT GTCGCACGAC GTCTATTACT GCATGGTCGC GCCCGATGCG TCGAGCCAGC GGCGCGTGAC GATCTCGAAG GTGCTGCTGC TGGGGGTGGC GCTGTTCGCG TCGTATGTCG CGTCGCTCAA TACCGGGAAG ATCCTGTTCC TCGTCGGCGC CGCGTTTTCG CTGGCGGCGT CGAGCTTCTT TCCGGTGCTG GTGCTGGGGG TGTTCTGGAA GCGCACGACG ACGCGTGGCG CGATCGCCGG GATGGTGACG GGGTTGGCGG TGTGTGTGTA CTACATCGTG TCGACTTATC CGTTCTTCAC GCAGTTGACC GGGTTCGCCG GGCGTACGTG GTTCGGGATC GAGCCGATCA GCTCAGGCGT GTTCGGCGTG CCGGCGGGGT TCGCGGTGGC GATCGTGGTG AGTCTGTGTG ATAAGCGGCC GGATGAGTAT ACGCGGGCGT TGGTGGATTA CATTCGGCAT CCGTGA
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Protein sequence | MLTHRLIRAY ALYTLGFLGF VLLMWRIERA TGSGVWIGYV FLFVPIAVYA VIGLLSRTSD LVEYYVAGRR VPSAFNGMAT AADWLSAASF IGLAGSLYAT GYDALAYVMG WTGGFCLVAF LLAPYVRKLA RYTIPDFLGT RFSSTAVRAL AAGAAILCSF VYLVAQIQGI GLIATRFIGV DFAIGIFCGL AGILVCSFLG GMRAVTWTQV AQYIILISAI LIPVSLIAMK NGLGPVPQFN YGKLMERVAA REAQVRDAHD EQQVRDAYRR QAAAIQTRLD RLPASYADAR RHLVDQLADL RRHNGPLREI SQRERELADF PRDPAAARVA WTQARDDLLA RAEPPVPMHE PFPAASEDER KPRERNFLAL LLCLSLGTAS LPHILTRYNT TTSVASARRS VGWTLFFIAL FYLSVPVLAV LIKYEILANL VGRPFAELPA WVTQWHHFEP DLIGVVEVIR DGIVHWSEIQ MQPDMVVLAA PEIAGLPYVV SGLIAAGALA AALSTADGLL LTIANALSHD VYYCMVAPDA SSQRRVTISK VLLLGVALFA SYVASLNTGK ILFLVGAAFS LAASSFFPVL VLGVFWKRTT TRGAIAGMVT GLAVCVYYIV STYPFFTQLT GFAGRTWFGI EPISSGVFGV PAGFAVAIVV SLCDKRPDEY TRALVDYIRH P
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