| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5884 |
|---|
| Symbol | |
|---|
| ID | 4096945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | - |
|---|
| Start bp | 445685 |
|---|
| End bp | 446269 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638019161 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_625722 |
|---|
| Protein GI | 107028627 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2862] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00645] conserved hypothetical transmembrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCC CGCATTCGTC CGGCCATCCC GGCCGCCGCC CGCTTCGCCC CCTTCCCGCG
CTGATTTTCA TGAGCCGCTG GCTCCAGGTT CCGCTTTATC TCGGCCTGAT CGTCGCGCAG
GGCGTCTACG TGTTCCTGTT CCTGAAGGAA GTCTGGCACC TGCTGTCGCA TGCGACCGGC
CTCGACGAAA TCAGCGTGAT GCTCGCCGTG CTCGGCCTGA TCGACGTGGT GATGATCTCG
AACCTGCTGA TCATGGTGAT CGTCGGCGGG TATGAAACGT TCGTGTCGCG GCTCGGCATC
GAGGGCCACC CCGACGAGCC CGAGTGGCTC GACCACGTGA ACGCGGGCGT GCTGAAGGTC
AAGCTGTCGA TGGCGCTGAT CAGCATTTCG TCGATCCACC TGCTCAAGAC CTTCATCAAC
CCCGACCAGC ACACGACGCA CGCGATCATG TGGCAGGTGA TCATCCACGT GTCGTTCCTC
GTGTCGGCGC TCGTGATGGC GTGGGTCGAT CGCCTGACGA CGCACACGCA CCCGGCCCAT
TTCCACGAGG CGCACGCGCC CGCGGCGTCC CGACCGGCGG CCTGA
|
|---|
| Protein sequence | MSAPHSSGHP GRRPLRPLPA LIFMSRWLQV PLYLGLIVAQ GVYVFLFLKE VWHLLSHATG
LDEISVMLAV LGLIDVVMIS NLLIMVIVGG YETFVSRLGI EGHPDEPEWL DHVNAGVLKV
KLSMALISIS SIHLLKTFIN PDQHTTHAIM WQVIIHVSFL VSALVMAWVD RLTTHTHPAH
FHEAHAPAAS RPAA
|
|---|
| |