Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5883 |
Symbol | |
ID | 4096944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 444117 |
End bp | 445640 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638019160 |
Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
Protein accession | YP_625721 |
Protein GI | 107028626 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGTCA TCAAACAGGA AGACCTGATC CAGAGCATCG CGGATTCGCT GCAGTACATC AGCTACTACC ACCCGCTCGA CTACATCCAG GCCCTCGGCC GCGCGTACGA GCTGGAAGAG AGCCCGGCGG CGAAGGACGC GATCGAGCAG ATCCTCACGA ACAGCCGCAT GTGCGCGGAA GGCAAACGCC CGATCTGCCA GGACACCGGC ATCGTGACGA TCTTCGTGAA GGTCGGCATG GACGTGCGCT GGGACGGCGC GACGATGGGC CTCACCGACA TGATCAACGA AGGCGTGCGC CGCGGTTACA CGCACCCGGA CAACGTGCTG CGCGCGTCGA TCGTCAATCC GCCGGAAGGC GCCCGCAAGA ACACGAAAGA CAACACGCCG GCCGTGATCC ACTACGAGAT CGTGCCGGGC GACAAGGTCG ACGTGCAGGT CGCGGCGAAG GGCGGCGGCT CGGAGAACAA GTCGAAGTTC GTGATGCTGA ACCCGTCCGA TTCGATCGTC GACTGGGTGC TGAAGACGGT CCCGACGATG GGCGCCGGCT GGTGCCCGCC GGGCATGCTC GGGATCGGCA TCGGCGGCAC CGCCGAGAAG GCGATGCTGA TGGCGAAGGA ATCGCTGATG GAGCCGATCG ACATCCAGGA AATCATCGCG CGCGGCCCGA AGGACTGGGT CGAGGAACTG CGCGTGGAAC TGCACGAGAA GGTCAACGCG CTCGGCATCG GCGCGCAGGG CCTCGGCGGC CTCGCGACCG TGCTGGACGT GAAGATCATG GCGGCGCCGA CGCACGCGGC GTCGAAGCCG GTCGCGCTGA TCCCGAACTG CGCGGCCACG CGCCACGCGC ACTTCGTGCT CGACGGGTCG GGCCCGGCCA AATTGGAAGC GCCGTCGCTC GACGCCTGGC CGAAGGTGCA GTGGGAACCG AACACGGAAA CCAGCAAGCG CGTGGACCTG AACACGCTGA CGCCGGAAGA AGTCGCGAGC TGGACGCCGG GCCAGACGCT GCTGCTGTCG GGCAAGATGC TCACCGGCCG CGACGCCGCG CACAAGCGCA TCGCCGACAT GCTCGCGAAG GGCGAGAAGC TGCCGGTCGA TTTCACGAAC CGCGTGATCT ACTACGTCGG CCCGGTCGAT CCGGTGCGCG ACGAAGTGGT CGGCCCGGCC GGCCCGACGA CGGCCACGCG CATGGACAAG TTCACCGAGA CGATGCTCGC TCAGACGGGT CTGATCTCGA TGGTCGGCAA GGCCGAGCGC GGCCCGGTCG CGATCGACGC GATCAAGAAG CACAAGGCGG CCTACCTGAT GGCGGTCGGC GGCGCGGCCT ACCTCGTATC GAAGGCGATC CGCGGCGCGA AGGTGCTCGC GTTCGAAGAC CTCGGCATGG AAGCGATCTA CGAGTTCGAC GTGCAGGACA TGCCGGTGAC GGTCGCCGTC GATTCGTCGG GCACGTCGGT GCACCAGACG GGTCCGAAGG AATGGCAGGC GAAGATCGGC AAGATCCCGG TCGCCACCGC TTAA
|
Protein sequence | MTVIKQEDLI QSIADSLQYI SYYHPLDYIQ ALGRAYELEE SPAAKDAIEQ ILTNSRMCAE GKRPICQDTG IVTIFVKVGM DVRWDGATMG LTDMINEGVR RGYTHPDNVL RASIVNPPEG ARKNTKDNTP AVIHYEIVPG DKVDVQVAAK GGGSENKSKF VMLNPSDSIV DWVLKTVPTM GAGWCPPGML GIGIGGTAEK AMLMAKESLM EPIDIQEIIA RGPKDWVEEL RVELHEKVNA LGIGAQGLGG LATVLDVKIM AAPTHAASKP VALIPNCAAT RHAHFVLDGS GPAKLEAPSL DAWPKVQWEP NTETSKRVDL NTLTPEEVAS WTPGQTLLLS GKMLTGRDAA HKRIADMLAK GEKLPVDFTN RVIYYVGPVD PVRDEVVGPA GPTTATRMDK FTETMLAQTG LISMVGKAER GPVAIDAIKK HKAAYLMAVG GAAYLVSKAI RGAKVLAFED LGMEAIYEFD VQDMPVTVAV DSSGTSVHQT GPKEWQAKIG KIPVATA
|
| |