| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5878 |
|---|
| Symbol | |
|---|
| ID | 4096939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | - |
|---|
| Start bp | 440448 |
|---|
| End bp | 441182 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638019155 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_625716 |
|---|
| Protein GI | 107028621 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGCT ACGGTATCGC GCACGTCTGG GCGCAAGGTG ATTTCGTCAC GCGCGCCATT
GCGATCACGC TGCTCGTGAT GTCGGTCCTG TCGTGGATCG TGATCGTCAT CAAGGGCTGG
AACGTGATTC GCCTGAACCG CCTCACGAAG AACGCCGAAC AGGCATTCTG GCATTCCGAC
AATTTCGACG ACGGCATCAA GAAGCTCGGC CTCGCCGCAT CGACGCCGAA CGACAATCCG
TTCCTCGCGC TCGCGCTGTC GGGCAAGGAA GCCGCCGACC ACCACCATCA GACGCAACCG
CACCTGCACG ACCGCATGGA CGTGTCGGAC TGGGTCACGC GCTGCCTGAA GGACACGATG
GACGAAGGCA TCTCGCGTAT GCAGAGCGGC CTCGCGATCC TCGCATCGGT CGGCAGCACG
GCGCCGTTCG TCGGCCTGTT CGGCACGGTC TGGGGCATCT ACCACGCGCT GCTCGCGATC
GGTGCCACCG GCCAGACGTC GATCGACCAG GTCGCGGGCC CGGTCGGCGA ATCGCTGATC
ATGACGGCCT TCGGCCTGTT CGTCGCGATT CCCGCGGTGC TCGGCTACAA CGCGCTGACC
CGCGCGAACA AGGGCGTCGT CAGCAAGCTC CGCCGCTTCG CGCACGGTCT GCACGCGTAC
TTCGTGACGG GTGCGAGCCT CGCGTCGTCG TCGACGCGCG ACGGTCTGCG TCTCGCATCG
CGCGCCGCCA GCTGA
|
|---|
| Protein sequence | MQSYGIAHVW AQGDFVTRAI AITLLVMSVL SWIVIVIKGW NVIRLNRLTK NAEQAFWHSD
NFDDGIKKLG LAASTPNDNP FLALALSGKE AADHHHQTQP HLHDRMDVSD WVTRCLKDTM
DEGISRMQSG LAILASVGST APFVGLFGTV WGIYHALLAI GATGQTSIDQ VAGPVGESLI
MTAFGLFVAI PAVLGYNALT RANKGVVSKL RRFAHGLHAY FVTGASLASS STRDGLRLAS
RAAS
|
|---|
| |