Gene Bcen_5875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5875 
Symbol 
ID4096936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp437653 
End bp438525 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content68% 
IMG OID638019152 
ProductPirin-like 
Protein accessionYP_625713 
Protein GI107028618 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCG CTCGCTCGCT TGATCGTACC TACCCCGCGC TTCGCACCAC CGAAGGCGGC 
GGTTTCGTGG TTCACCGTCC GTTCCCGACG CGGCTGCTGA TGGACTTCGA TCCGTTCCTG
CTGCTCGATG AAATGGGCCC CGTCGACTAC GCCCCCGGCG AAGCCGTGGG CGCGCCCGAC
CATCCGCATC GCGGCTTCGA GACCGTGACG TACGCGCTCG ACGGGCGCTT CCGCCATCGC
GACTCGTCCG GCCATACCGG CACGCTCGGC CCCGGCGACG TGCAGTGGAT GACGGCCGGC
GCCGGCGTCG TGCACAGCGA GATGCCTGAT CCGGCGTTCG CCGAGGCAGG CGGGCGTTCC
CACGGCTTCC AGCTGTGGGT CAACCTGCCG CGCCGCGACA AGATGATCGC ACCGCTCTAC
CAGGAGATCC CGGCCGCCCG CATTCCGACC GCGACGTCGC CGGACGGCCG CGCGCGTGTG
CGCGTCATCG CCGGCGAAGC ATTCGGCGTA CAGGCCGCGA TCGAGACGCG CACGCCGATT
CTCTATCAGC ACTTCACGCT GGAGCCGGGT GCAACCGTCA CACAGCCCGT GCCGGCCGGT
TATCGCGTGT TTGCCTATCC GATCGACGGA ACGGGCCTCT ACGGGCCTGA CAGGCAGGCG
GTCGACGCAC GGCACATGAT CGTCTACGGA GACGATGGCG ACACCGTCAC GTTCGCTGCC
GGCGACACGT CGCTCGACCT GCTGCTGATC GGCGGCGTAC CGCTCAACGA GCCGATCGTC
CGCTACGGCC CGTTCGTGAT GAATACCGAA GAAGAGATCC GGCAGGCCGT CGTCGACTAC
CAGACCGGTC GCATGGGTCG CATCGAAGCG TAA
 
Protein sequence
MTTARSLDRT YPALRTTEGG GFVVHRPFPT RLLMDFDPFL LLDEMGPVDY APGEAVGAPD 
HPHRGFETVT YALDGRFRHR DSSGHTGTLG PGDVQWMTAG AGVVHSEMPD PAFAEAGGRS
HGFQLWVNLP RRDKMIAPLY QEIPAARIPT ATSPDGRARV RVIAGEAFGV QAAIETRTPI
LYQHFTLEPG ATVTQPVPAG YRVFAYPIDG TGLYGPDRQA VDARHMIVYG DDGDTVTFAA
GDTSLDLLLI GGVPLNEPIV RYGPFVMNTE EEIRQAVVDY QTGRMGRIEA