Gene Bcen_5823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5823 
Symbol 
ID4096817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp372299 
End bp372952 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content66% 
IMG OID638019095 
ProductTetR family transcriptional regulator 
Protein accessionYP_625661 
Protein GI107028566 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACCA GTACTCCCCC TCAGCGTCTG ACCGACCGAA AGCGCGCGGC CATCGTCGAT 
GCGGCGATCG AGGAATTTCT CGCCGCGGGC TACGATGCGA CGAGCATGGA TCGTATCGCT 
GCGCGCGCGG ACGTGTCGAA GCGCACCGTC TATAACCACT TCCCCGGTAA GGAGACGCTG 
TTCGCCGCGA TCCTGAACAA GTTGTGGGAT GCGACTCGCA CCGGCAGTTC GCCGACCTAT 
CGCGCCGACG TGCCGCTGCG CGAGCAACTG CTCGCGTTGC TCGACCGCAA ATTGCGGTTG 
ATGAACGACG AGGCCTTTCT CGCGCTGGCG CGTGTCGCGA TCGGCGCGGC CATCCATTCG 
CCGGAACGGG CGCGCGACAT GGTCGAGCGT CTCGGCGAGC GCGAGGAAGA TGTCACGGTC 
TGGGTGCGCG CGGCCGCGGC GGCCGGTCGC CTGTCGGTCA CCGATCCGGT GTTCGCCGCG 
CATCAGTTGC ATGGCGCGGT GAAGGCATTC GCGTTCTGGC CGCAGATCAC GATGGGCCAG 
CCGCCGCTGA CGGCGCAGGA GCAGCAGAAG GTCGCGGAAT CGGCTGCCGA TATGTTCCTT 
GCGTACTACG CGCGACCCGA CGACGGCGCT GCACGGCATC GCCGGCAAGA CTGA
 
Protein sequence
MDTSTPPQRL TDRKRAAIVD AAIEEFLAAG YDATSMDRIA ARADVSKRTV YNHFPGKETL 
FAAILNKLWD ATRTGSSPTY RADVPLREQL LALLDRKLRL MNDEAFLALA RVAIGAAIHS 
PERARDMVER LGEREEDVTV WVRAAAAAGR LSVTDPVFAA HQLHGAVKAF AFWPQITMGQ 
PPLTAQEQQK VAESAADMFL AYYARPDDGA ARHRRQD