Gene Bcen_5752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5752 
Symbol 
ID4096381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp292492 
End bp293457 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content69% 
IMG OID638019027 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_625593 
Protein GI107028498 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAACC AGATTTCGCC AACCGGCCGT TCCACTGTCC TCCTCATCGG CGCGTCCGGC 
CTGCTCGGCC GTGCGGTTGC CGCCTGCCTG GCTCGCGAAT CGTCGTTGAC GCTGCTCGCC 
ACCATACGGA ACCCGCAAAG CGCCGGTGCA AAACTGCTCG CGTTGCCGCC GGAAAACATC 
GCCGAGCTGG ACTTGCTCGA CCAGCCGTCC CTTGAGCGCA TTTTTGAAAC GCACCGACCG 
GCAGCGGTGA TTCTCTGCGC CGCCGAACGC CGCCCCGACG TCTGCGAACG CGACCCGGAC 
GCGGCTCGCG CGATCAACGT CACCGCGCCC GCCCGCATCG GCGCACTCGC CACGCGATAC 
GGCGCATGGA CGCTTGGCAT TTCGACCGAC TACGTCTTCG ACGGCAAGGC GGCGCCCTAC 
CGCGAAGACG CGACCCCGAA CCCGCTGAAC ATCTACGGCC GCACCAAGCT CGAAGGCGAG 
GCCGCGCTAC TTGCCGCGTC GCCGCTGTCG TGCGTGCTGC GCCTGCCGTT GCTGTTCGGC 
CCGATCGCCG ACTGGAGCGA ATCGGCCGTC ACGAGCCTCG TGCCGGCCGT CGTCGCGTCT 
TCGCGGCCGG GCGCCGACGC GGTCGGCATG GACGCATGGG CGATCCGTTA CCCGACTTAC 
ACGCCCGACG TCGCGCAGGT CATCCGCGAC CTGACGCTGC GCCATCTCGC GGGCGAATCC 
GTCACGGGCA TTCGCCATTG GTCGAGCGAG GAGCCGATGA CGAAGTACGA CATCGCGCAG 
CGAATTGCCG CCGCGCTCGG CATCGACGCG TCGCTCACGC CGATCACGCA GCCGACCGAC 
GCGACGCCGC GCCCGTACGA CTGCCATCTG GATGCCGCGC GCGTGCGCGC GCTCGGGATC 
GATTACGCGA CGCCGTTCGA TACGGCGCTG CGGACCGTGC TGCGCGACGC GCCGCGGGCG 
CTGTAG
 
Protein sequence
MPNQISPTGR STVLLIGASG LLGRAVAACL ARESSLTLLA TIRNPQSAGA KLLALPPENI 
AELDLLDQPS LERIFETHRP AAVILCAAER RPDVCERDPD AARAINVTAP ARIGALATRY 
GAWTLGISTD YVFDGKAAPY REDATPNPLN IYGRTKLEGE AALLAASPLS CVLRLPLLFG 
PIADWSESAV TSLVPAVVAS SRPGADAVGM DAWAIRYPTY TPDVAQVIRD LTLRHLAGES 
VTGIRHWSSE EPMTKYDIAQ RIAAALGIDA SLTPITQPTD ATPRPYDCHL DAARVRALGI 
DYATPFDTAL RTVLRDAPRA L