Gene Bcen_5732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5732 
Symbol 
ID4096342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp272465 
End bp273853 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content67% 
IMG OID638019008 
Productamino acid permease-associated region 
Protein accessionYP_625574 
Protein GI107028479 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAACG ACAGGCCAGG TCGAACCGCA TCGGCCGCCG CGATGCATGA ATGCGGCGCG 
GACGCGCAGC GCGGCGACAC GGACGCACGC AAGCCGCATC TGCTCGGACT CTCGACGCTG
GTAATCTTCG GCCTCGCATA CATGCTGCCG ATGACGGTGT TCACGACCTA CGGCCTCGTC
ACGAGCGAGA CGAACGGGCA TCTGACGGCC GCGTACGCGG TCACGCTGAT CGCGATGCTG
TTCACCGCGC GCAGCTACGG CCACATGGCG CGGCTGATGC CGAGCGCCGG GTCGGCCTAT
ACGTTCGCGA GCCGCAACTT CGGTACGTCG GCCGGCTTCA TGGTCGGCTG GGCGTTGCTG
ATGGATTACC TGTTCATCCC GATGATCAGC TACCTCGCGA TCGGCATCTA CATGAAGCAG
ATCTTTCCGG CGGTGCCGGC CAGCGTGTGG ATCGTCGGCA GCATCGCGCT GATCACCGGG
CTGAACATCG TCGGCATCCG GCTCGTCAAT CGCGTGAACC TGATCCTGAT CGCGAGCCAG
CTCGTGTTCA TCGCGGTCTT CGTGATCGCG TCGGCGCACG TCGCGGCCGG CGAAGGGCTG
TCGATGGCCG TCGCGTTGCC GTCGTCCGGC GATGCGCGCG CGATCTTCGC CGGCTCCGCG
ATCCTGTGCC TGTCGTTCCT CGGCTTCGAT GCGGTCACCA CACTGTCGGA GGAAACGCGC
GAGCCGCGGC GCACGGTGCC GCGCGCCATC CTGCTCTGCA CGCTTGCGAG CGGCCTGCTG
TTCATGCTGA TCGCGTATGT TGGACAACTG GTGTTTCCCG ACTGGCACGC GTTCAAGGAT
CTCGATTCGG CGAGCCTCGA CCTGATGCGG CGAGTCGGCG GCCGCACGCT GTCGGCGTTC
TTCGTGGCGG TGTACGTGGC CGGCTGCTTC GCGAGTGCGA TGGCGGGCCA GGCGAGCGTG
ACGCGCGTGC TGTTCGCGAT GGGCCGCGAC CGCGTGCTGC CCGAATCGGT GTTCGGTCAT
CTGCATGCGC GGCTGCGCAC GCCGGTGCGC GCGACGCTTG CGGTCGGCGT CGTGTCGCTG
TCCGCGCTGT TCATCACGCT CGATCTTGCG TCGACGATGA TCAGTTTCGG CGCGCTCGTC
GCGTTCGCGA TCGTGAACCT GTGCGTGATG CGCAGCTATC TGGGCCGGCC GGAGCATCGC
CACGCCGTGG GCTGGATCGC GTACGGCCTG ATGCCGGCGA TCGGCTTCGC GATGAACGTG
TGGCTCTGGT CGGGGCTGTC GCGCCAGACG TTCTATGTCG GCATCGGCTG GCTCGTGCTC
GGGCTCTGCC AGCTCGTATG GCTGACGCGC GGCTTCACGC GCCCGGCGCC GACGCTGTCG
ATGAATTGA
 
Protein sequence
MDNDRPGRTA SAAAMHECGA DAQRGDTDAR KPHLLGLSTL VIFGLAYMLP MTVFTTYGLV 
TSETNGHLTA AYAVTLIAML FTARSYGHMA RLMPSAGSAY TFASRNFGTS AGFMVGWALL
MDYLFIPMIS YLAIGIYMKQ IFPAVPASVW IVGSIALITG LNIVGIRLVN RVNLILIASQ
LVFIAVFVIA SAHVAAGEGL SMAVALPSSG DARAIFAGSA ILCLSFLGFD AVTTLSEETR
EPRRTVPRAI LLCTLASGLL FMLIAYVGQL VFPDWHAFKD LDSASLDLMR RVGGRTLSAF
FVAVYVAGCF ASAMAGQASV TRVLFAMGRD RVLPESVFGH LHARLRTPVR ATLAVGVVSL
SALFITLDLA STMISFGALV AFAIVNLCVM RSYLGRPEHR HAVGWIAYGL MPAIGFAMNV
WLWSGLSRQT FYVGIGWLVL GLCQLVWLTR GFTRPAPTLS MN