| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5634 |
|---|
| Symbol | |
|---|
| ID | 4096688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | - |
|---|
| Start bp | 167339 |
|---|
| End bp | 168331 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638018910 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_625476 |
|---|
| Protein GI | 107028381 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAATG TGAGATTGGC AAAGCGATTG AGAAGTTTGC CTTCGCTGGA TTTCCTGAGA
GGCTTCGAAT GCGCGGCGCG CCATTTGAGT TTCACGCGTG CGGGGCAGGA GCTCAACGTC
ACGCAATCGG CCGTGAGTCG CCAGGTCAAG GCGCTCGAAG AGCAGCTCCG GATCGAGCTC
TTTCACCGGC ATATTCGTTC CCTGACGCTG ACCGACAAGG GGCGTGAGTT GTACGACGCG
ATCTCGTTCG CGTTGTCCGA TCTGGAATCG GTGGTCGGCA AGCTGTCGTC GAGTGTCGGC
CAGCGTTCCA TCTCGTTGTC GACCACCGTC TCGTTCGCGG CGCTGTGGCT GATTCCGCGC
CTCGGTTCGT TCCGCGCCAG CTATCCGGAC ATCGACGTGC GCGTGTCGGC AACGAGCGAA
ATTGAAGATC TTAAACGCAA ACGTTTGCAC CTGGCCGTGC GCTACGCCGG CCCGTATACG
TCGACTGACG ATACCGACGT GCTGTTTCGC GAGCGTGTCG TGGCGGTGTG CAGCCCGAGC
CTGATGACGG CGGCGGGCGA CGCCGCGTCG ATGCAGCCGG CCGACCTCGA CAAGCACGTG
CTGCTGCATC TCGACGACCC GCGCGGCGAA TGGCCGTGGC ACGGCTGGAG CCATCTGCTG
AAGGCGCTCG GCGTGCCGCG GCTGCGGCCG GCCGGGGCGC TGCACTTCAG CCAGTACGAT
CAACTGGTCC AGGCCGCCGT CGATGGGCAC GGCATCGCGA TCGGCAGGCG GCCGCTGGTC
GACGGGCTGC TGAGGCAGGG GCGGCTCGTC GAGCTGTTCC CGCATTGCAC CGTTGCATCG
GGCAGCTACG TACTCGTGCA GAACCCCGAT GCGTGCAACG AATTCGATAT CGCGGTGCTG
ACCAACTGGC TGCTCGAACA AGCGTGCCAG CCGCTCGCGT CGGAGCAGGA TACCGCCGGC
AGCAACGTGC TGCCGATGTA TCGCGTCGGA TAG
|
|---|
| Protein sequence | MANVRLAKRL RSLPSLDFLR GFECAARHLS FTRAGQELNV TQSAVSRQVK ALEEQLRIEL
FHRHIRSLTL TDKGRELYDA ISFALSDLES VVGKLSSSVG QRSISLSTTV SFAALWLIPR
LGSFRASYPD IDVRVSATSE IEDLKRKRLH LAVRYAGPYT STDDTDVLFR ERVVAVCSPS
LMTAAGDAAS MQPADLDKHV LLHLDDPRGE WPWHGWSHLL KALGVPRLRP AGALHFSQYD
QLVQAAVDGH GIAIGRRPLV DGLLRQGRLV ELFPHCTVAS GSYVLVQNPD ACNEFDIAVL
TNWLLEQACQ PLASEQDTAG SNVLPMYRVG
|
|---|
| |