Gene Bcen_5604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5604 
Symbol 
ID4096832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp125895 
End bp127223 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content65% 
IMG OID638018880 
Productsodium:dicarboxylate symporter 
Protein accessionYP_625446 
Protein GI107028351 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACCG TCATCGACTC CCCGCCCGTC GTCGGCGCGG CCCGCAAGCC GCGCGTCGGG 
CTCGCGTGGC AGATCGTCAT CGGCCTCGTC ATCGGCATCG CGACCGGGCT CGTGCTGAAC
CGGTTTCCGC AATTGCGCGA CACGGCCGTG TCCGGGTTGC TGCAGCCGGC CGGCGACATC
TTCATCAAGC TGGTGCGGAT GATCGTCGTG CCGATCGTAT TCACGAGCAT GGTGATCGGC
ATCGCCGGCG TGGGCGACGG CAAGTCGCTC GGACGCCTCG GCATCAAGAC GCTGCTCTAT
TTCGAGGTGA TCACGACGAT CGCGATCGTG CTCGGGCTCG TGATCGGCAA CGTGCTGCAG
CCGGGCGTCG GCACCGACAT GTCGCAACTC GGGCACACCG ACATTTCCCG TTACCAGCAG
ACCACGCAAC AGGTGCAGCA GGCGCACCAC GGGCTGATGG CGCTGGTGCT CGGCATCATC
CCGGACAACA TCGTCGCGTC GATGGCCAAG GGCGACCTGC TGCCGGTGAT CTTTTTCTCC
CTGCTGTTCG GGCTCGGGCT GCAGTCGGTG CCGGAAGAGC ATCGCAAGCC GGTGCTCGCG
ATGCTCAAGG GCGTCGCCGA CGCGATGTTC AAGGTGACGA ACATGGTGAT GCGCTATGCG
CCGGTCGGCG TGTGCGCGCT GATCGCGGTG ACCGTTTCAA GTTTCGGTTT CGGCTCGCTG
CTGCCGCTGC TGAAACTCGT CGCCGTCACT TACTTCGCGA TCCTGCTGTT CGCGATCGCC
GTGCTCGGCG TGACCGCGCG GCTGTTCGGG TTCCGCATCC TGACGCTGCT GCGCGTGATC
AAGGACGAAC TGATCATCGC GTTCTCGACC TGCAGTTCGG CGACCGTGCT GCCGCAACTG
ATGAAGAAGA TGGAGGACTA CGGCGTGCCG AAGAGCATCA CGACGTTCGT GGTGCCGACC
GGCTACACGT TCAACCTCGA CGGCGCGTCG ATCTATCTCG GCATCGGCAC GCTGTTCGTC
GCGCAACTGT ATGGCGTGCA CCTCGGCTGG CAGCAGCAGG TGCTGCTGAC GCTGACCATG
GTCGTCACGT CGAAGGGCGC CGCCGGTGTG CCGGGCTTCA TGTTCGTGAT CATGCTCGCG
ACGCTCGCGA GCGCGGGATT GCCGCTCGAA GGGCTCGCGT TCATTGCCGG CGTCGACCGG
ATCATGGACA TGGGCCGCAC CGCGCTGAAC GTCGTCGGCA ATGCGCTGGC GCCGCTCGTC
ATCGCGAAAT GGGAAGGCCG GTACGACGCG GAGAAGGGCC GCGCGTACGT CGAATCGCTG
CGCGGCTGA
 
Protein sequence
MDTVIDSPPV VGAARKPRVG LAWQIVIGLV IGIATGLVLN RFPQLRDTAV SGLLQPAGDI 
FIKLVRMIVV PIVFTSMVIG IAGVGDGKSL GRLGIKTLLY FEVITTIAIV LGLVIGNVLQ
PGVGTDMSQL GHTDISRYQQ TTQQVQQAHH GLMALVLGII PDNIVASMAK GDLLPVIFFS
LLFGLGLQSV PEEHRKPVLA MLKGVADAMF KVTNMVMRYA PVGVCALIAV TVSSFGFGSL
LPLLKLVAVT YFAILLFAIA VLGVTARLFG FRILTLLRVI KDELIIAFST CSSATVLPQL
MKKMEDYGVP KSITTFVVPT GYTFNLDGAS IYLGIGTLFV AQLYGVHLGW QQQVLLTLTM
VVTSKGAAGV PGFMFVIMLA TLASAGLPLE GLAFIAGVDR IMDMGRTALN VVGNALAPLV
IAKWEGRYDA EKGRAYVESL RG