Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5582 |
Symbol | |
ID | 4097187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 102211 |
End bp | 103377 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638018858 |
Product | porin |
Protein accession | YP_625424 |
Protein GI | 107028329 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACA AGAAGATCAA CATCAGCGTT ATCGCTGTTG CCGCCTTCGC AGCATCCTCG GCAGCAATGG CACAGTCGTC GGTCACCCTA TATGGCATGC TCGATGCGGG CATCGGCTAT ACGTCGAACA TCAATGGCCA CAGCCGGTTC GGCCTCGATG GCGGCGCCGC GGGCTCGAAC AAGTGGGGCC TTCGAGGGCA AGAGGACCTC GGTGGCGGCC TCCAGGCGGT ATTCAAGATC GAGAATGGTT TCAACATCGC GACAGGCGGC ATCGGCGGCC AAGGGCCGAT CGGTACCACG CGTTCGCTGT TCAACCGTCA GGCCTACGTG GGTCTCGCAT CCAGTCAGTA CGGCGCGTTG CGCATGGGGC GCCAGCTCGA CGCCGTGACG GAAATGGTTC AGGTCCTGAC GGGTGACGCC ATTTCCGCGT CGACCTTCTC GACGCCGGGT GACGTCGACA ACAACGACAA CACGACGAAC CAGAACAACG CGGTGAAGTA CATCTCGCCG ATCATCCACG GCTTCCAGGC TGAAGCCGCG TACTCGTTCG GCGGCGTGGC CGGTTCAACG GGGTCGGGTC AATCGTGGTC GGCGGCCGCG ACCTACGCTC AAGGCGGCCT GACGGTCGCC GGCGGCTACT TCCGTGCGGC CAACCAGGGC GAGAACGGAT GGACGAACGC AACGGCGCAA CCGAGCTTCG GCGGCGCACT GGGCTATCCG AGTTCGGGCT ACAACGGCGG CAATGCGTTC AAGAGCGCGG GCATCGCGCA AGTCGCCGCG CAATACGAGG TGGGGCCGTA CACGGCCGGC TTGCGCTACT CGAACGCCCA GTACAAGGGT AACGACGGCC AGCCGTCGAT CCACTTCAAC GTGCTGGGTG CGCTCCTGCA GTACCGGGTC ACGCCGGCAC TGTCGCTGGC GACGGGTTAC ACGTACGTCT ACGGCTCCGC GGCCACGCCC ACGCAAGCAG CCGAAGGACG CACGATGGCC TCGATCAACC AGGTGTCGCT GGGTGCGACG TACTCGCTGT CGAAGAGTAC CGCGCTGTAC GCGATGGGTG CCTACGTGCA TGCCAAGGGC GCGCAGGCTT CGGCTGCCGA CTTCGGCAAC ACCTCGTCGG GCGGCAACCA GGTTCAGGTC AACATCGGCA TGTTCCACGG CTTCTGA
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Protein sequence | MKNKKINISV IAVAAFAASS AAMAQSSVTL YGMLDAGIGY TSNINGHSRF GLDGGAAGSN KWGLRGQEDL GGGLQAVFKI ENGFNIATGG IGGQGPIGTT RSLFNRQAYV GLASSQYGAL RMGRQLDAVT EMVQVLTGDA ISASTFSTPG DVDNNDNTTN QNNAVKYISP IIHGFQAEAA YSFGGVAGST GSGQSWSAAA TYAQGGLTVA GGYFRAANQG ENGWTNATAQ PSFGGALGYP SSGYNGGNAF KSAGIAQVAA QYEVGPYTAG LRYSNAQYKG NDGQPSIHFN VLGALLQYRV TPALSLATGY TYVYGSAATP TQAAEGRTMA SINQVSLGAT YSLSKSTALY AMGAYVHAKG AQASAADFGN TSSGGNQVQV NIGMFHGF
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