Gene Bcen_5579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5579 
Symbol 
ID4097184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp100165 
End bp100827 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content59% 
IMG OID638018855 
ProductGntR family transcriptional regulator 
Protein accessionYP_625421 
Protein GI107028326 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCGA AAGTCTCGAC AGATGCAGAG CTTGCCTACG AGGAGATCCG AGCGAGGATC 
TTTGACGGCC GCTTTGCGCC CGGGCAGAAA GTATCCCACC GGGGCCTGTC CGACGAACTC 
GGCTTCGGCC AAATGCCCGT GCGCAGCGCA TTGCATTTGC TCGAATCCGA AGGGTTGGTC 
GTCGTCATCG AAAAGAGTGG CACCTATGTT GCGTCGCCGA CTACCAGCGA TCTCCGCGAA 
ATTTTCGAAA TGCGGCTGGC CCTGGAGAGT ACCGCGGCGT TTCTTGCAGC GAGGTCGGGC 
GTGACGGCAG GCCTTCGCGA CGCGGCAGCA AAAATGCAGG AACTGCTTGA CCGGGACGTC 
GCGGACATCA TGCTCGAGCA ACGTATCGGC TGGGTGTTTC ATCAGGAGTT GTTCGCCGCC 
GCACGGAACG TGCGTATCTC ATCGGCGTAT GGTCTATTGC GAGCCCAGAC CCTGGCCCTG 
AACGAACTCC CGCGTGGCGA CGCTGAAACC GTTCGGCGCG GCACGATCGA ACACCTGCAC 
ATCTTTCACG CAATCGAAGC GAACGACGGC GAGCTGGCGC GTCAGCATAT GTGGAATCAC 
ATCGTTGACG GTACGCCGGC ACGGATCAAA CTGCTAAAGG CACGGCATGA ACACGAAAAA 
TAA
 
Protein sequence
MTSKVSTDAE LAYEEIRARI FDGRFAPGQK VSHRGLSDEL GFGQMPVRSA LHLLESEGLV 
VVIEKSGTYV ASPTTSDLRE IFEMRLALES TAAFLAARSG VTAGLRDAAA KMQELLDRDV 
ADIMLEQRIG WVFHQELFAA ARNVRISSAY GLLRAQTLAL NELPRGDAET VRRGTIEHLH 
IFHAIEANDG ELARQHMWNH IVDGTPARIK LLKARHEHEK