| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5566 |
|---|
| Symbol | |
|---|
| ID | 4097172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | - |
|---|
| Start bp | 87289 |
|---|
| End bp | 87750 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638018844 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_625410 |
|---|
| Protein GI | 107028315 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.600891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCACTGC AGATCGATAA CGAAAGCTAC ATGAGTCGGC TGAGAAAGAA GGTTGGAAGC
GATCTGATTT TGAGTCCGTC CGTTGCAGCT GTGATTCACG ACCATGAAGG CAAATTGCTG
CTTCAGGAGA AGTCGTCTGG AGAGGCGTGG AGTCTTCCCG CTGGTGGAGT TGAACTGGGC
GAAAGCCCGC AAGAGGCCAT CTTCCGCGAG GTCATGGAGG AAACCGGATA TGTAATCCGC
ATTCACGGCA TTCTCGGCGT GTTTGGCGGA CGACTGTTTC GATACACGTA TCCAAGTGGC
GACCGCGTCG AATACGTAGT GACTTTGTTC CAATGCAAAA TCATTGATGG CTCAGGGATA
CCAAGCGATC CTGAAACCAC GTCAACTCGA TATTTTGGAA GGCATGACAT GCCGGAACTG
GCGCTCCCGT ATCCGAAGGA CGACTTGTTT CTCCCTTTCT AA
|
|---|
| Protein sequence | MSLQIDNESY MSRLRKKVGS DLILSPSVAA VIHDHEGKLL LQEKSSGEAW SLPAGGVELG
ESPQEAIFRE VMEETGYVIR IHGILGVFGG RLFRYTYPSG DRVEYVVTLF QCKIIDGSGI
PSDPETTSTR YFGRHDMPEL ALPYPKDDLF LPF
|
|---|
| |