Gene Bcen_5559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5559 
Symbol 
ID4097342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp81338 
End bp81994 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID638018837 
Producthypothetical protein 
Protein accessionYP_625403 
Protein GI107028308 
COG category[S] Function unknown 
COG ID[COG3665] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03424] urea carboxylase-associated protein 1 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.412671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATCA TCGAAAGCCG TCTCGACCCG CGCGACGCGA TCCACGACGT CACGCTGAGC 
GCGGGCGACC CGTGGCTGCA CGACCTGAAG CGCGGGCAGA CCTTCCGCAT TCTCGACCTC 
GAAGGCAACC AGGCCGTCGA CACGCTGTTC TACCGCACCG ACGATCCCGA AGAGCGCTAC 
AGCGCGCAGG ACACGATCCG CTCGCAGCGC AACCTGTACC TGAGCGCCGG CAGCGTGCTC 
ATGTCGAGCC GCGGCAACCC GATGGCGACG ATCGTCGCCG ATACGTGCGG CCGTCACGAC 
ACGCTCGGCG GCGCGTGCGC GGCCGAGAGC AACACGGTGC GCTATGCGCT CGACAAGCGC 
TACATGCACA ACTGCCGCGA CAGCTTCCTC AACGCGATCT CGCACTGCAC GTGCGGCGCC 
GGCGCGCGGC TTACCAAGCG CGACCTGGTC GGCAACGTCA ACTTCTTCAT GAACGTGCCC 
GTCACGCCGC TCGGCGGGCT CACGTTCGAG GACGGCATCT CGGCGCCCGG CAAGTACGTC 
GAGATGCGTG CGGAGATGGA CGTCACGGTG CTGATCTCGA ACTGCCCGCA ACTCAACAAT 
CCGTGCAACG GCTACAACCC GACGCCCGTG CGCCTCATGA TCTGGGAGGC GGAATGA
 
Protein sequence
MPIIESRLDP RDAIHDVTLS AGDPWLHDLK RGQTFRILDL EGNQAVDTLF YRTDDPEERY 
SAQDTIRSQR NLYLSAGSVL MSSRGNPMAT IVADTCGRHD TLGGACAAES NTVRYALDKR 
YMHNCRDSFL NAISHCTCGA GARLTKRDLV GNVNFFMNVP VTPLGGLTFE DGISAPGKYV 
EMRAEMDVTV LISNCPQLNN PCNGYNPTPV RLMIWEAE