Gene Bcen_5556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5556 
Symbol 
ID4097339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp74725 
End bp75699 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content66% 
IMG OID638018835 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_625401 
Protein GI107028306 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0488095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACGA CCCGCAACAC GACCGGCTGG CTCGCCGTGC GCCGCGAGCT GACGACGCGC 
GGCAAATGGA CGCTCGCGCT GGCGTCCTTC CTGCTGCCGT TCGCCGTCTG GTGCCTGATC 
AGTTATGTGC CGTTCGTCTG GCATCCGCAG ATGCGCATCA CGAACCCGGG CAGCGTCGAC 
TATTTCCAGA CCGGGATGCA GATCGACCGC GACGTGTTCG ACGACGAGCT CGCGCATGCG 
CGTGCGACGC ACGCGGCGGT GCCCGAGGGC GAGCGCGCGA ATCCGGTCTA CCTGCCGGCG 
CCGCACCAGG TCTTGCGCGC GTTCTACACG GCGTTCACGA CACCGCCCGC GTCGCGCGAT 
GGCGTGTGGC TGCACGAAAG CCTGTGGCAC AGCATCCGCA TCATCTTCTG GGGCTTCGTG 
ATTTCGTCCG CGATCGGCGT GCCGCTCGGC ATCGTCTGCG GCACCTTCAG TGCGCTCGCG 
CGGCTGCAGG AGCCGTTCCT GGAGTTCTTC CGCTACCTGC CGGCGCCGGC GTTCGGCGCG 
CTGATGGTCG CGATTCTCGG CATCTATGAC GCGCCGAAGA TCGCGATCAT CGTGATCGGT 
ACGCTGTTCC AGCAGGTGCT GATCATCGCG AACACCACGC GCAAGCTCGA ATACGGGCTG 
TTCGAGGCCG CGATGACGCT CGGCACGAAG AAGCTGAAGC TGCTCACGCA CGTCGTGATT 
CCGGGCGTGC TGCCGGACCT GTATCGCGAT CAGCGCATCC TGCTCGGCTG GGCGTGGACT 
TACCTGATCG TCGCCGAGCT GGTCGGCACG AGCTCGGGCA TCACGTGGTA CATCAGCCAG 
CAGGCGCGCT ATCAGCATTT CGACAACGTA TATGCGGCGA TCCTGATGAT CGGGATCATC 
GGCCTCGGCA CCGACATCGT GCTCGGGCTG CTCGGCCGCC GGCTCTTTCC GTGGGACCGC 
ACGCTGAAAG CGTGA
 
Protein sequence
MTTTRNTTGW LAVRRELTTR GKWTLALASF LLPFAVWCLI SYVPFVWHPQ MRITNPGSVD 
YFQTGMQIDR DVFDDELAHA RATHAAVPEG ERANPVYLPA PHQVLRAFYT AFTTPPASRD 
GVWLHESLWH SIRIIFWGFV ISSAIGVPLG IVCGTFSALA RLQEPFLEFF RYLPAPAFGA 
LMVAILGIYD APKIAIIVIG TLFQQVLIIA NTTRKLEYGL FEAAMTLGTK KLKLLTHVVI 
PGVLPDLYRD QRILLGWAWT YLIVAELVGT SSGITWYISQ QARYQHFDNV YAAILMIGII 
GLGTDIVLGL LGRRLFPWDR TLKA