Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5519 |
Symbol | |
ID | 4096745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 37880 |
End bp | 39076 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638018798 |
Product | major facilitator transporter |
Protein accession | YP_625364 |
Protein GI | 107028269 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.752642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGCAACA GAACCATCCG ATTCGCATTT TTCCTGTGCG GCTTCGCGGC TTTTCTCAAT CTCTATTCGA CGCAGGGCAT CCTGCACGAA CTCGCCGCGG CCTTCAACGT GAGCGCGGAA CGAGCAGGCC AGGGCATCAG CGCCACCACG TTGGCGGTTG CCATTATCGC GCCGTTCGTC GGTGCGCTGG CTGCCCGCTT CGATCGCCGA ACGGTGATTT CGTGGGCTGC CGTGGCGTGT GTGCTTCCCG TCGTGTGGTC GGCACACGCG GCGAGCTTCT CATCGTTCCT CGCCGCCCGC TTTGCGGCGG GCATGCTGAT GCCGTTCATC TTCGCGATCT CGATCGCCTG CATCGGCGAG ATCTTCAGCC ACGACGCGGC GACGGAGGTC AGCGCACTCT TCGTCGCCGG CACGACACTC GGCGGCTTCG CCGGACGCTT CGTGACCAAC GTGCTGACGT CCGGGTTCGG CTGGCGTCAC GCGCTCGATT TCATCGCGTT CCTGTGTCTC GCAACGGGCC TCGCGATCCA CGCGTGCCTG CCGTCGTCCG GCGCCGCGCG TCCGGAAGGC GAGGGAGCGT CGATACCGCG CTGGAAGCTC CTGACGCGCG GCCCGCTGCT GGCCTCGTTT CTGGTCGGCG CATGCGTGCT CGCCTCGCAG GTCGCGACGT TCACCTTCGT CGGACTGCGG CTGGCCCGCG CGCCATTTGG CTTCAATACG GTCGAGATCG GCGCGATCTA TGCGGTGTTT CTCGTCGCGG TCGTCGTCAC GCCGCTCGCG GGCCGCGTCG CGGCGAAACG CGGCCCGCGC GATCTCGCGC TCGCGGCGAC CGGGCTCGCG ATGGTCGGTG CATTGCTGAC CTTGTCGGGC AGTGTCGCAG CGATCCTGAC CGGTCTCGCG CTCAGTTCGA CCGCGGTGTT CGTCGAGCAG GCGTCGGCCA ATGCGTTCAT CTCGCGCGCG GCACCGGGTG CAAGATCGAC GGCGATCGGC GTCTACCTGT CCTTCTATTA CTTTGGCGGC AGTCTCGGCT CGATCCTGCC CGTTCCCGCA TGGAATCGGT GGGGCTGGGT GGGCTGCGTC GCATTCGTCG TCGTAGCGCA GGCGATCGCA GGCGCGCTCG TGTTTTTCTT CTGGCGCGGG ACGCCTCCCG CCGGCGCAAG CAAACCACGC TCACCTGAAG TCAGGCTGAC TCGGTAG
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Protein sequence | MGNRTIRFAF FLCGFAAFLN LYSTQGILHE LAAAFNVSAE RAGQGISATT LAVAIIAPFV GALAARFDRR TVISWAAVAC VLPVVWSAHA ASFSSFLAAR FAAGMLMPFI FAISIACIGE IFSHDAATEV SALFVAGTTL GGFAGRFVTN VLTSGFGWRH ALDFIAFLCL ATGLAIHACL PSSGAARPEG EGASIPRWKL LTRGPLLASF LVGACVLASQ VATFTFVGLR LARAPFGFNT VEIGAIYAVF LVAVVVTPLA GRVAAKRGPR DLALAATGLA MVGALLTLSG SVAAILTGLA LSSTAVFVEQ ASANAFISRA APGARSTAIG VYLSFYYFGG SLGSILPVPA WNRWGWVGCV AFVVVAQAIA GALVFFFWRG TPPAGASKPR SPEVRLTR
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