Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5512 |
Symbol | |
ID | 4096738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 29355 |
End bp | 30296 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638018791 |
Product | extracellular solute-binding protein |
Protein accession | YP_625357 |
Protein GI | 107028262 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.913196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAGAC CCGCCTTTGC CGTTACACGC ATCGCCCGTG TGCTGGCCGC CGCGCTGATC GCCGGGAGCG CCGTCGCCGC GCACGCTGCA TCGTTCGACC TGAGCCCCGA GCAGCCGGCC CGGCAGCGCG GCGCCGTAAA CCCGGCCGTC GAGCAGGCGC TGCCGGCCGG CTTCCGGTTC GCCGAAGCGA ACACGCTGAC GATCGGCATC GCGCCGAACC TGCCGCCGCT CAGCACCTAT GCGACCGACG CACGCACGGT GGTCGGCTTC GATCCCGATC TCGCGCAACT GATCGCGGAC AGCGTCGGCC GCAAGCTGAA GATCGTGCCG CTCGCGTGGG CCGACTGGCC GCTTGCGCTG CAGTCCGGCA AGGTCGATGC GGTGATTTCG AACGTGACGG TGACCGAGCA GCGCAAGGAG AAGTTCGATT TCTCGACTTA CCGGAAGGAC CAGCTCGGCT TCTACGTGAA GACCGGCAGC AAGCTGGCCG CGATCCGCGA GCCGAAGGAC GTCGCGGGGC TGCGCGTCGT GACCGATTCG GGCACGAACC AGGAAAAGAT CCTGCTCGAA TGGAACCGGC AGAACGTCGC GCGCGGCCTC GCGCCGGTCG AGATCCAGTA TTACGCGGAT GCGGCCGAGC GCTGGGTCGC GCTGCAGTCG GGCCGGGTCG ACACGATCTT CAGCGTGAAT TCGATGCTCG CGTACCAGGC GTCGCTGCGC GGCGATGCGA AACTGATCGG TACCGTCAGC GGCGGCTGGC CGCGCACCGC GGATATCGCG ATCACGACCC GCAAGGGCAG CGGCCTCGCC GATCCGCTGA CGCTCGCGAT CAATGCGCTG ATCGCGAACG GCAGCTACCG GAAGGCGCTG GATCACTGGC AACTGGATGC CGAGGCGATC GAGCGCTCGC AGACCAATCC GCCGGGGCTG CCGCGCACCT GA
|
Protein sequence | MSRPAFAVTR IARVLAAALI AGSAVAAHAA SFDLSPEQPA RQRGAVNPAV EQALPAGFRF AEANTLTIGI APNLPPLSTY ATDARTVVGF DPDLAQLIAD SVGRKLKIVP LAWADWPLAL QSGKVDAVIS NVTVTEQRKE KFDFSTYRKD QLGFYVKTGS KLAAIREPKD VAGLRVVTDS GTNQEKILLE WNRQNVARGL APVEIQYYAD AAERWVALQS GRVDTIFSVN SMLAYQASLR GDAKLIGTVS GGWPRTADIA ITTRKGSGLA DPLTLAINAL IANGSYRKAL DHWQLDAEAI ERSQTNPPGL PRT
|
| |