| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5424 |
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| Symbol | |
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| ID | 4094612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | + |
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| Start bp | 2728471 |
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| End bp | 2730600 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638018704 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_625270 |
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| Protein GI | 107027759 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.122893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC CCACCGCCAA CCCGTCGCCG CCGCCCGCGC CGCCATCCAC ACCGCCGCGC
CGCCGTCGCA TCTGGCGCAC GCTCGCGGGC GCGCTGCTCG GCCTGACGCT CGCGTGCGCG
GGCATCGGCG CATGGACGAT CGATCGCATC TGGACGCAGT TGCCGTCCGT CGAACACCTG
GCCGTCTATC GTCCCGCTTT GCCGCTGCGG ATTTTCTCGC GCGATGGTGA CCTGCTGGCC
GAATACGGCG TCGAGCGGCG CGAGTTCGTG CCGCTCGAAC GCATCCCGCC GCTGATGCGG
CATGCGCTGC TCGCGGCCGA GGACGCGAAG TTCTACGAAC ACGGCCCGGT CGACATCGGT
GGCCTTGCGC GCGCGACGTT CGCGAACGTC GTGACGGGCC AGCCGGGGCA GGGAGGCAGC
ACGATCACGA TGCAGGTCGC GCGCAACTTC TACCTGACGC GCGACAAGGT GCTGAGCCGC
AAGCTCGCCG AGATCCTGAT GGCCGCCAAG CTCGAGCGCG AATACAGCAA GGACAAGCTG
CTCGAGCTGT ACATGAACGA GATCTATCTC GGCGAGCGCG CCTACGGCTT CGCGGCCGCC
GCGCACGTGT ACTTCGGCAA GCCGCTCGAC GCGCTGAGCG CGGGCGAGGC GGCCGTGCTC
GCCGGGCTGC CGAAGGCGCC GTCCGCATTC AATCCGGTCG TCAACCCGGC GCGCGCGACC
GCGCGGCGCA ACTACGTGCT CGGCCGGATG CATGCGCTTG GCCAGCTCGA CGAGGCGACG
TATCGCGCGG CCGTCGACGC GCCGATCGCA TTGGCGACCA CGCCGCCGCC CGGCATCGTC
GCGGCGCCGT ACGTCGCCGA GCGGGCGCGC CGGATGATGG TCGAACGGTT TCATGACGAC
GCGTACACGC TCGGCCTCGA CGTGACGACG ACGATCTCGA TGCGCGACCA GCGCGCGGCC
GAAGCCGCAC TCGACCGTAC GCTGAGCCGC CAGTCCCGCG CGAAGCGCGA TATGCGCAAC
GGTCTCGAAG GCGCACTCGT GTCGCTCGAT GCGGCCACCG GCGACATGCT CGCGCTGGTC
GGCGGCGCGG ATTTCGATCG CAACGTGTTC GACCATGCGC TGCAGGCGTA TCGCCAGCCG
GGGTCGAGCT TCAAGCCGTT CGTCTATTCC GCGGCGCTGG AGAAGGGCTA CTTCCCCGGC
GTGCTCGTCG ACGATACGCA GCGCACACTC ACGCACGCGG AAACCGGCGC GCGGCCGTGG
CGTCCGCGCA ATTTCGGCAA TCGCTACGAA GGCTTCATCC CGGTGCGGCG CGGGCTCGTG
CGCTCGAAGA ACCTGGTCGC GGTCAGCCTG ATGCAGGCCA CCGACGCGCG CTACGTGCAG
CAGCACGCGG TGCATTTCGG CTTCGACGCG CAGCGCAATC CGGCGTCGCT GCCGCTCGCG
CTCGGCGCGG GCGCCGTGAC GCCGCTCGAA CTCGCGAGCG CGTACAGCGT GTTCGCGAAC
GGCGGGACGC GGATGGAGCC GCGCCTGATC CTGTCAGTGA AGCAGCGTCA CGGCGGCGCG
ATGTACGAGG CGACCGTGCC GGCGGGCGAG CGGGTCGTAT CGGCGCGCAA TGCGTTCGTG
ATGGACAGCA TGCTGCGCGA CGTCGTACGG GCCGGTACTG CACGCGGCGC GCTCGCGCTC
AGGCGTGACG ACGCGGCCGG CAAGACGGGC ACGTCGAACG GATCGAAGGA CGTATGGTTC
GCCGGCTATT CGTCGGGCAT CGTCGCGGTT GCGTGGCTCG GCTACGACAC GCCGCGCCCG
ATGGGGCGCG CGACCGGCGC GACGCTCGCG CTACCGGTCT GGCTCGACTA CATGAAGACG
GCCGTCGACG GGCGCACGCC GGTCGCGGCG ACGCCGCCGC AGGACGTCGC GCTGGTGGAC
GGCGATTTCG TCTACGCCGA ATACACGCGC GGCACCTGCA CGGCCGACGT GCCGGCGTAT
ATCCGCAGCC GCTTCGCGTG CGGCGGCGCG GCAGCCAGCG ATGCGCCGGA TGCGCCTGGC
GATAACGGCA AGCGCGATGA ACCGATGCCC GCCGCCGTCG ACGCGGCCGA GCGCGAACGC
GTGCTCGACC TGTTCCGGAC CGACGACTGA
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| Protein sequence | MTDPTANPSP PPAPPSTPPR RRRIWRTLAG ALLGLTLACA GIGAWTIDRI WTQLPSVEHL
AVYRPALPLR IFSRDGDLLA EYGVERREFV PLERIPPLMR HALLAAEDAK FYEHGPVDIG
GLARATFANV VTGQPGQGGS TITMQVARNF YLTRDKVLSR KLAEILMAAK LEREYSKDKL
LELYMNEIYL GERAYGFAAA AHVYFGKPLD ALSAGEAAVL AGLPKAPSAF NPVVNPARAT
ARRNYVLGRM HALGQLDEAT YRAAVDAPIA LATTPPPGIV AAPYVAERAR RMMVERFHDD
AYTLGLDVTT TISMRDQRAA EAALDRTLSR QSRAKRDMRN GLEGALVSLD AATGDMLALV
GGADFDRNVF DHALQAYRQP GSSFKPFVYS AALEKGYFPG VLVDDTQRTL THAETGARPW
RPRNFGNRYE GFIPVRRGLV RSKNLVAVSL MQATDARYVQ QHAVHFGFDA QRNPASLPLA
LGAGAVTPLE LASAYSVFAN GGTRMEPRLI LSVKQRHGGA MYEATVPAGE RVVSARNAFV
MDSMLRDVVR AGTARGALAL RRDDAAGKTG TSNGSKDVWF AGYSSGIVAV AWLGYDTPRP
MGRATGATLA LPVWLDYMKT AVDGRTPVAA TPPQDVALVD GDFVYAEYTR GTCTADVPAY
IRSRFACGGA AASDAPDAPG DNGKRDEPMP AAVDAAERER VLDLFRTDD
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